DRSC/TRiP Functional Genomics Resources

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Protein Alignment Elk and KT2/3

DIOPT Version :9

Sequence 1:NP_477009.1 Gene:Elk / 37047 FlyBaseID:FBgn0011589 Length:1284 Species:Drosophila melanogaster
Sequence 2:NP_567651.1 Gene:KT2/3 / 828311 AraportID:AT4G22200 Length:802 Species:Arabidopsis thaliana


Alignment Length:611 Identity:146/611 - (23%)
Similarity:262/611 - (42%) Gaps:88/611 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly   220 YKPEKGGVKTKLKLGNNFMHSTEAPFPEYKTQSI---KKSRLILPHYGVFK-------------- 267
            |......:.:.:||.....|..:....||...|:   ..|:||||..||..              
plant     5 YSASHCNLSSDMKLRRFHQHRGKGREEEYDASSLSLNNLSKLILPPLGVASYNQNHIRSSGWIIS 69

  Fly   268 ------GIWDWVILVATFYVALMVPYNAAFAKAD--RQTKVSDVIVEALFIVDILLNFRTTFVSR 324
                  ..|::.:::...|.|.:.|:..||..:.  |...::|.||:..|.|||:|.|...::..
plant    70 PMDSRYRCWEFYMVLLVAYSAWVYPFEVAFLNSSPKRNLCIADNIVDLFFAVDIVLTFFVAYIDE 134

  Fly   325 KGE-VVSNSKQIAINYLRGWFALDLLAALPFDHLYASDLYDGEDS---HIHLVKLTRLLRLARL- 384
            :.: :|...||||:.||..||.:|:.:.:|||.:  ..|..|..:   ..:|:.|.|..||.|: 
plant   135 RTQLLVREPKQIAVRYLSTWFLMDVASTIPFDAI--GYLITGTSTLNITCNLLGLLRFWRLRRVK 197

  Fly   385 -----LQKIDRYSQHTAMILTLLMFSFTLAAHWLACIWYVIAVKEYEWFPESNIGWLQLLAERKN 444
                 |:|..|||........||..:..| .|...|.:|:||    :.:|.....|...:.....
plant   198 HLFTRLEKDIRYSYFWIRCFRLLSVTLFL-VHCAGCSYYLIA----DRYPHQGKTWTDAIPNFTE 257

  Fly   445 ASVAILTTAETYSTALYFTFTSLTSVGFGNVSANTTAEKVFTIIMMLIGALMHAVVFGNVTAIIQ 509
            .|::|     .|..|:|::.|::|:||:|::.|:.|.|.||..:.||....:.|.:.||:|.::.
plant   258 TSLSI-----RYIAAIYWSITTMTTVGYGDLHASNTIEMVFITVYMLFNLGLTAYLIGNMTNLVV 317

  Fly   510 RMYSRRSLYESKWRDLKDFVALHNMPKELKQRIEDYF-----QTSWSLSHGIDIYETLREFPEEL 569
            ....|...:.:......:||..:.:|..||.:|..|.     ..|.:..|.||      :.|:.:
plant   318 EGTRRTMEFRNSIEAASNFVNRNRLPPRLKDQILAYMCLRFKAESLNQQHLID------QLPKSI 376

  Fly   570 RGDVSMHLH-REILQLPIFEAASQGCLKLLSLHIKTNFCAPGEYLIHKGDALNYIYYLCNGSMEV 633
            ...:..||. ..:.::.:|:..|:..|.||...:|..:..|.|.:|.:.:|.:.:|.:.:|.:|:
plant   377 YKSICQHLFLPSVEKVYLFKGVSREILLLLVSKMKAEYIPPREDVIMQNEAPDDVYIIVSGEVEI 441

  Fly   634 IKDDM----VVAILGKGDLVGSDINVHLVATSNGQMTATTNSAGQDVVVRSSSDIKALTYCDLKC 694
            |..:|    |:..|..||:.|   .|..:.......|..|.|..|.:.:::|..|:.:.      
plant   442 IDSEMERESVLGTLRCGDIFG---EVGALCCRPQSYTFQTKSLSQLLRLKTSFLIETMQ------ 497

  Fly   695 IHMGGLVEVLRLYPEYQQQFAN-DIQHDLTCNLREGYENQDSDIGPSFPLPSISED------DEN 752
            |.......:|:.:.::.::.:| ||.     :|:.....:::|:.|    |:|:.:      ..|
plant   498 IKQQDNATMLKNFLQHHKKLSNLDIG-----DLKAQQNGENTDVVP----PNIASNLIAVVTTGN 553

  Fly   753 REEAEEGGKGEKENGGGPPSGASPLH 778
            ....:|..|.:.........|.:|||
plant   554 AALLDELLKAKLSPDITDSKGKTPLH 579

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ElkNP_477009.1 PAS 36..132 CDD:238075
PAS_3 41..129 CDD:285623
Ion_trans 285..516 CDD:278921 71/242 (29%)
Ion_trans_2 <455..510 CDD:285168 19/54 (35%)
Crp 583..>650 CDD:223736 19/70 (27%)
CAP_ED 586..715 CDD:237999 29/132 (22%)
KT2/3NP_567651.1 PLN03192 23..802 CDD:215625 143/593 (24%)
ANK repeat 574..604 CDD:293786 4/6 (67%)
ANK repeat 606..668 CDD:293786
ANK repeat 670..695 CDD:293786
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 111 1.000 Domainoid score I2073
eggNOG 1 0.900 - - E1_KOG0498
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 1 1.000 - - mtm8395
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X71
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
65.810

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