DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Elk and KCNH6

DIOPT Version :9

Sequence 1:NP_477009.1 Gene:Elk / 37047 FlyBaseID:FBgn0011589 Length:1284 Species:Drosophila melanogaster
Sequence 2:NP_110406.1 Gene:KCNH6 / 81033 HGNCID:18862 Length:994 Species:Homo sapiens


Alignment Length:1058 Identity:369/1058 - (34%)
Similarity:558/1058 - (52%) Gaps:174/1058 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MPARKGLLAPQNTFLDTIATRFDGTHSNFVLGNAQANGNPIVYCSDGFVDLTGYSRAQIMQKGCS 65
            ||.|:|.:|||||:||||..:|:|....|::.|||.....|:||:|||.:|.||||.::||:.|:
Human     1 MPVRRGHVAPQNTYLDTIIRKFEGQSRKFLIANAQMENCAIIYCNDGFCELFGYSRVEVMQQPCT 65

  Fly    66 CHFLYGPDTKEEHKQQIEKSLSNKMELKLEVIFYKKEGAPFWCLFDIVPIKNEKRDVVLFLASHK 130
            |.||.||:|......::.::|....|.|:::::|:|:.:.|.||.|:||:|||...|::|:.:.:
Human    66 CDFLTGPNTPSSAVSRLAQALLGAEECKVDILYYRKDASSFRCLVDVVPVKNEDGAVIMFILNFE 130

  Fly   131 DITHTKMLEMNVNEECDSVFALTAALLGARFRAGSNAGMLGLGGLPGLGGPAASDGDTEAGEGNN 195
            |:.       .:..:|.| .:|:..||...|     .|..|..|.||..||.     |..|:...
Human   131 DLA-------QLLAKCSS-RSLSQRLLSQSF-----LGSEGSHGRPGGPGPG-----TGRGKYRT 177

  Fly   196 L-DVP------AGCNMGRRRSRAV--LYQLSGHYKPEKGGVKTK-----LKLGNNFMHSTEAPFP 246
            : .:|      ...|:.:.||.:.  :..::.|...|:....|:     |.||.:.:       |
Human   178 ISQIPQFTLNFVEFNLEKHRSSSTTEIEIIAPHKVVERTQNVTEKVTQVLSLGADVL-------P 235

  Fly   247 EYKTQSIKKSRLILPHYGVFKGIWDWVILVATFYVALMVPYNAAFAKADRQTK------------ 299
            |||.|:.:..|..:.||..||.:|||:||:...|.|:..||:|||..:|:...            
Human   236 EYKLQAPRIHRWTILHYSPFKAVWDWLILLLVIYTAVFTPYSAAFLLSDQDESRRGACSYTCSPL 300

  Fly   300 -VSDVIVEALFIVDILLNFRTTFVSRKGEVVSNSKQIAINYLRGWFALDLLAALPFDHLYASDLY 363
             |.|:||:.:|:|||::|||||:|:...||||:.::||::|.:|||.:|::||:|||.|......
Human   301 TVVDLIVDIMFVVDIVINFRTTYVNTNDEVVSHPRRIAVHYFKGWFLIDMVAAIPFDLLIFRTGS 365

  Fly   364 DGEDSHIHLVKLTRLLRLARLLQKIDRYSQHTAMILTLLMFSFTLAAHWLACIWYVIAVKEYEWF 428
            |...:.|.|:|..|||||.|:.:|:||||::.|.:|.|||.:|.|.|||||||||.|...|..:.
Human   366 DETTTLIGLLKTARLLRLVRVARKLDRYSEYGAAVLFLLMCTFALIAHWLACIWYAIGNVERPYL 430

  Fly   429 PESNIGWLQ----LLAERKNAS--VAILTTAETYSTALYFTFTSLTSVGFGNVSANTTAEKVFTI 487
             |..||||.    .|.:|.|.|  .:..:..:.|.|||||||:|||||||||||.||.:||||:|
Human   431 -EHKIGWLDSLGVQLGKRYNGSDPASGPSVQDKYVTALYFTFSSLTSVGFGNVSPNTNSEKVFSI 494

  Fly   488 IMMLIGALMHAVVFGNVTAIIQRMYSRRSLYESKWRDLKDFVALHNMPKELKQRIEDYFQTSWSL 552
            .:||||:||:|.:||||:|||||:||..:.|.::...:|:|:..|.:|..|:||:|:|||.:||.
Human   495 CVMLIGSLMYASIFGNVSAIIQRLYSGTARYHTQMLRVKEFIRFHQIPNPLRQRLEEYFQHAWSY 559

  Fly   553 SHGIDIYETLREFPEELRGDVSMHLHREILQ-LPIFEAASQGCLKLLSLHIKTNFCAPGEYLIHK 616
            ::|||:...|:.|||.|:.|:.:||||.:|| .|.|..|.:|||:.|::..||....||:.|:|.
Human   560 TNGIDMNAVLKGFPECLQADICLHLHRALLQHCPAFSGAGKGCLRALAVKFKTTHAPPGDTLVHL 624

  Fly   617 GDALNYIYYLCNGSMEVIKDDMVVAILGKGDLVGSDINVHLVATSNGQMTATTNSAGQDVVVRSS 681
            ||.|:.:|::..||:|:::||:|||||||.|:.|..:::|.             ..|     :||
Human   625 GDVLSTLYFISRGSIEILRDDVVVAILGKNDIFGEPVSLHA-------------QPG-----KSS 671

  Fly   682 SDIKALTYCDLKCIHMGGLVEVLRLYPEYQQQFANDIQHDLTCNLR------------------- 727
            :|::|||||||..|....|:|||.:||.:.:.|.:.:  ::|.|||                   
Human   672 ADVRALTYCDLHKIQRADLLEVLDMYPAFAESFWSKL--EVTFNLRDAAGGLHSSPRQAPGSQDH 734

  Fly   728 EGY---ENQDS---DIGPSFPLPSISEDDENREEAEEGGKGEKENGGGP-----PSGASPLHNIS 781
            :|:   :||..   ::||.||         ::..:..|...:...|.||     |..|.|| :||
Human   735 QGFFLSDNQSGSPHELGPQFP---------SKGYSLLGPGSQNSMGAGPCAPGHPDAAPPL-SIS 789

  Fly   782 NS------------PLHATRSPL-------LGMGSPRNQ------RLHQR-----GRSLITLRET 816
            ::            |.|:.:||.       |.:||...|      ||..|     .|.|..|::.
Human   790 DASGLWPELLQEMPPRHSPQSPQEDPDCWPLKLGSRLEQLQAQMNRLESRVSSDLSRILQLLQKP 854

  Fly   817 NKR-HRT--LNAACSLDRGSFEEPEPLEEEQSSGGKRPSLERLDSQVSTLHQDVAQLSAEVRNAI 878
            ..: |.:  |.|..|.|....    |:..|.:|.|.|.....|....:..:.|:...|.:.||:.
Human   855 MPQGHASYILEAPASNDLALV----PIASETTSPGPRLPQGFLPPAQTPSYGDLDDCSPKHRNSS 915

  Fly   879 SALQEMTFTSNAMTSHSSLK------FPPARSIPNISGVAGTRSGVAV----EHGLMGGVLAAAE 933
            ..:..:...::...:.||.:      :||..|..:...|.|...|...    ||  :|.|....:
Human   916 PRMPHLAVATDKTLAPSSEQEQPEGLWPPLASPLHPLEVQGLICGPCFSSLPEH--LGSVPKQLD 978

  Fly   934 LAAMQRSSSHP--PEVWG 949
               .||..|.|  ...||
Human   979 ---FQRHGSDPGFAGSWG 993

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ElkNP_477009.1 PAS 36..132 CDD:238075 36/95 (38%)
PAS_3 41..129 CDD:285623 36/87 (41%)
Ion_trans 285..516 CDD:278921 123/249 (49%)
Ion_trans_2 <455..510 CDD:285168 40/54 (74%)
Crp 583..>650 CDD:223736 31/67 (46%)
CAP_ED 586..715 CDD:237999 49/128 (38%)
KCNH6NP_110406.1 PAS_9 29..132 CDD:290162 40/102 (39%)
PAS 41..132 CDD:238075 36/90 (40%)
Ion_trans 296..520 CDD:278921 115/224 (51%)
Ion_trans_2 <463..517 CDD:285168 40/53 (75%)
Selectivity filter. /evidence=ECO:0000250 476..481 4/4 (100%)
Crp 588..>704 CDD:223736 52/133 (39%)
CAP_ED 594..705 CDD:237999 49/128 (38%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 720..790 16/79 (20%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 880..946 13/65 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0498
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D247304at2759
OrthoFinder 1 1.000 - - FOG0000148
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X71
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
54.820

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