DRSC/TRiP Functional Genomics Resources

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Protein Alignment Elk and HCN2

DIOPT Version :10

Sequence 1:NP_477009.1 Gene:Elk / 37047 FlyBaseID:FBgn0011589 Length:1284 Species:Drosophila melanogaster
Sequence 2:NP_001185.3 Gene:HCN2 / 610 HGNCID:4846 Length:889 Species:Homo sapiens


Alignment Length:802 Identity:183/802 - (22%)
Similarity:323/802 - (40%) Gaps:184/802 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly   173 GGLPGLGGPAASDGDTEAGEGNNLDVPAGCNMGRRRSRAVLYQLSGHYKPEKGGVKTKLKLGNNF 237
            |..|| .|||...|..|||       |||...|.:.| .:..|.....:|   ||.   |.....
Human   133 GPAPG-PGPAEEAGSEEAG-------PAGEPRGSQAS-FMQRQFGALLQP---GVN---KFSLRM 182

  Fly   238 MHSTEAPFPEYKTQSIKKSRLILPH-YGVFKGIWDWVILVATFYVALMVPYNAAFAKADRQTK-- 299
            ..|.:|  .|.:.:.:|.:...:.| |..|:..||:.:|:......:::|....|.| |..|.  
Human   183 FGSQKA--VEREQERVKSAGAWIIHPYSDFRFYWDFTMLLFMVGNLIIIPVGITFFK-DETTAPW 244

  Fly   300 -VSDVIVEALFIVDILLNFRTTFVSRKG-EVVSNSKQIAINYLRGWFALDLLAALPFDHLYASDL 362
             |.:|:.:..|::|::|||||..|.... |::.:.::|...|||.||.:|.::::|.|:::.. :
Human   245 IVFNVVSDTFFLMDLVLNFRTGIVIEDNTEIILDPEKIKKKYLRTWFVVDFVSSIPVDYIFLI-V 308

  Fly   363 YDGEDSHIH-------------LVKLTRLLRLARLLQKIDRYSQ---------HTAMILTLLMFS 405
            ..|.||.::             ::.|.|||||:||::.|.::.:         ...|.:..|:..
Human   309 EKGIDSEVYKTARALRIVRFTKILSLLRLLRLSRLIRYIHQWEEIFHMTYDLASAVMRICNLISM 373

  Fly   406 FTLAAHWLACIWYVIAVKEYEWFPES---------NIGWLQLLAERKNASVAILTTAETYSTALY 461
            ..|..||..|:.:::.:  .:.||.:         |..|                 :|.||.||:
Human   374 MLLLCHWDGCLQFLVPM--LQDFPRNCWVSINGMVNHSW-----------------SELYSFALF 419

  Fly   462 FTFTSLTSVGFGNVSANTTAEKVFTIIMMLIGALMHAVVFGNVTAIIQRMYSRRSLYESKWRDLK 526
            ...:.:..:|:|..:..:..:...|::.|::||..:|:..|:.||:||.:.|.|..|:.|::.::
Human   420 KAMSHMLCIGYGRQAPESMTDIWLTMLSMIVGATCYAMFIGHATALIQSLDSSRRQYQEKYKQVE 484

  Fly   527 DFVALHNMPKELKQRIEDYFQTSWSLSHGIDIYETLREFPEELRGD-VSMHLHREILQLPIFEAA 590
            .:::.|.:|.:.:|:|.||::..:. ....|....|.|....||.: |:.:..:.:..:|:|..|
Human   485 QYMSFHKLPADFRQKIHDYYEHRYQ-GKMFDEDSILGELNGPLREEIVNFNCRKLVASMPLFANA 548

  Fly   591 SQGCLKLLSLHIKTNFCAPGEYLIHKGDALNYIYYLCNGSMEVIKDDMVVAILGKGDLVGSDINV 655
            ....:..:...:|.....||:|:|.:|.....:|::.:|         ||::|.||         
Human   549 DPNFVTAMLTKLKFEVFQPGDYIIREGTIGKKMYFIQHG---------VVSVLTKG--------- 595

  Fly   656 HLVATSNGQMTATTNSAGQDVVV----RSSSDIKALTYCDLKCIHMGGLVEVLRLYPEYQQQF-- 714
                  |.:|..:..|...::.:    |.::.::|.|||.|..:.:....|||..||..::.|  
Human   596 ------NKEMKLSDGSYFGEICLLTRGRRTASVRADTYCRLYSLSVDNFNEVLEEYPMMRRAFET 654

  Fly   715 ----------------ANDIQHDLTCNLREGYEN--------------QDSDIG-------PSFP 742
                            .:.:||||...:....||              |.:::|       |..|
Human   655 VAIDRLDRIGKKNSILLHKVQHDLNSGVFNNQENAIIQEIVKYDREMVQQAELGQRVGLFPPPPP 719

  Fly   743 LPSISEDDENREEA---------------------------EEGGKGEKENGGGPPSGASPLHNI 780
            .|.::......::|                           ...|........|||..||| ...
Human   720 PPQVTSAIATLQQAAAMSFCPQVARPLVGPLALGSPRLVRRPPPGPAPAAASPGPPPPASP-PGA 783

  Fly   781 SNSPLHATR---------SPLLGMGSPRNQRLHQRGRSLITLRETNKRHRTLNAACSLDRGSFEE 836
            ..|| .|.|         :||.|...|. :||.:..|.| :..:.:..|.....|.|....|...
Human   784 PASP-RAPRTSPYGGLPAAPLAGPALPA-RRLSRASRPL-SASQPSLPHGAPGPAASTRPASSST 845

  Fly   837 PEPLEEEQSSGGKRPSLERLDS 858
            |. |....::....||.:|.||
Human   846 PR-LGPTPAARAAAPSPDRRDS 866

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ElkNP_477009.1 PAS_9 40..133 CDD:463873
PLN03192 270..>650 CDD:215625 99/415 (24%)
cNMP 586..716 CDD:197516 30/151 (20%)
HCN2NP_001185.3 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..159 14/33 (42%)
PBP1 <57..185 CDD:444064 20/66 (30%)
PLN03192 150..>688 CDD:215625 136/599 (23%)
Involved in subunit assembly. /evidence=ECO:0000250 158..209 12/59 (20%)
CAP_ED 544..652 CDD:237999 29/131 (22%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 754..889 30/118 (25%)
Blue background indicates that the domain is not in the aligned region.

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