DRSC/TRiP Functional Genomics Resources

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Protein Alignment Elk and CNGB3

DIOPT Version :9

Sequence 1:NP_477009.1 Gene:Elk / 37047 FlyBaseID:FBgn0011589 Length:1284 Species:Drosophila melanogaster
Sequence 2:NP_061971.3 Gene:CNGB3 / 54714 HGNCID:2153 Length:809 Species:Homo sapiens


Alignment Length:787 Identity:145/787 - (18%)
Similarity:285/787 - (36%) Gaps:230/787 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly   176 PGLGGPAASDGDTEAGEGNN--LDVPAGCNMGRRRSRAVLYQLSGHYKPEKGGVKTKLKLGNNFM 238
            ||..||.:......|....|  .|......:.|.|.|..||               |.||....:
Human   106 PGKEGPNSPQNKPPAAPVINEYADAQLHNLVKRMRQRTALY---------------KKKLVEGDL 155

  Fly   239 HSTEA--------PFPEYKTQSIKKSRLILPHYGVFKGIWD------------------------ 271
            .|.||        ..|..|....|.:.    ||  ::.:|.                        
Human   156 SSPEASPQTAKPTAVPPVKESDDKPTE----HY--YRLLWFKVKKMPLTEYLKRIKLPNSIDSYT 214

  Fly   272 ------WVILVATFY--------VALMVPYNAAFAKAD--RQTKVSDVIVEALFIVDIL-LNFRT 319
                  |::||...|        :.|:.||..    ||  ....::|:|.:.:::.|:| :..|.
Human   215 DRLYLLWLLLVTLAYNWNCCFIPLRLVFPYQT----ADNIHYWLIADIICDIIYLYDMLFIQPRL 275

  Fly   320 TFVSRKGEVVSNSKQIAINYLRGW-FALDLLAALPFDHLYASDLYDGEDSHIHLVKLTRLLR--- 380
            .|| |.|:::.:|.::..:|.... |.||:.:.:|||..|   |:.|.:.   :.:..|:|:   
Human   276 QFV-RGGDIIVDSNELRKHYRTSTKFQLDVASIIPFDICY---LFFGFNP---MFRANRMLKYTS 333

  Fly   381 -------LARLLQK--IDRYSQHTAMILTLLMFSFTLAAHWLACIWYVIAVKEYEWFPESNIGWL 436
                   |..::.|  |.|..:.|..:|.:|        |..||::|  ....||     .||..
Human   334 FFEFNHHLESIMDKAYIYRVIRTTGYLLFIL--------HINACVYY--WASNYE-----GIGTT 383

  Fly   437 QLLAERKNASVAILTTAETYSTALYFTFTSLTSVGFGNVSANTTAEKVFTIIMMLIGALMHAVVF 501
            :.:.:.:         ...|....|:...:|.::| |.....|..|.||.::....|..:.:.:.
Human   384 RWVYDGE---------GNEYLRCYYWAVRTLITIG-GLPEPQTLFEIVFQLLNFFSGVFVFSSLI 438

  Fly   502 GNVTAIIQRMYSRRSLYESKWRDLKDFVALHNMPKELKQRIEDYFQTSWSLSHGIDIYETLREFP 566
            |.:..:|....:.::.:.:...|...::..:::||.:::|:..:::.:|.....:|..:.|:..|
Human   439 GQMRDVIGAATANQNYFRACMDDTIAYMNNYSIPKLVQKRVRTWYEYTWDSQRMLDESDLLKTLP 503

  Fly   567 EELRGDVSMHLHREIL-QLPIFEAASQGCLKLLSLHIKTNFCAPGEYLIHKGDALNYIYYLCNGS 630
            ..::..:::.::..|: ::.:|:......:..:.|.:|:....||:::..||:....:|.:.:|.
Human   504 TTVQLALAIDVNFSIISKVDLFKGCDTQMIYDMLLRLKSVLYLPGDFVCKKGEIGKEMYIIKHGE 568

  Fly   631 MEVI---KDDMVVAILGKGDLVGSDINVHLVATSNGQMTATTNSAGQDVVVRSSSDIKALTYCDL 692
            ::|:   ....|:..|..|.:.|   .:.|:|...|.              |.::::.|..:.:|
Human   569 VQVLGGPDGTKVLVTLKAGSVFG---EISLLAAGGGN--------------RRTANVVAHGFANL 616

  Fly   693 KCIHMGGLVEVLRLYPEYQQQF----------------ANDIQHDL---------TCNL------ 726
            ..:....|.|:|..||:.::..                |...:.||         |..|      
Human   617 LTLDKKTLQEILVHYPDSERILMKKARVLLKQKAKTAEATPPRKDLALLFPPKEETPKLFKTLLG 681

  Fly   727 -----------------------------REGYENQDSDIGPSFPLPSISEDDENREEAEEGGKG 762
                                         .||.||:|..          .|:::.::|.|:.||.
Human   682 GTGKASLARLLKLKREQAAQKKENSEGGEEEGKENEDKQ----------KENEDKQKENEDKGKE 736

  Fly   763 EKENGGG----------PPSGASPLHNISNSPLHATRSPLLGMGSPRNQRL------HQRGRSLI 811
            .::...|          |...|||: .:...| |:.|..:|..|:.|...:      .:.|..::
Human   737 NEDKDKGREPEEKPLDRPECTASPI-AVEEEP-HSVRRTVLPRGTSRQSLIISMAPSAEGGEEVL 799

  Fly   812 TLRETNK 818
            |:....|
Human   800 TIEVKEK 806

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ElkNP_477009.1 PAS 36..132 CDD:238075
PAS_3 41..129 CDD:285623
Ion_trans 285..516 CDD:278921 53/246 (22%)
Ion_trans_2 <455..510 CDD:285168 12/54 (22%)
Crp 583..>650 CDD:223736 13/69 (19%)
CAP_ED 586..715 CDD:237999 25/147 (17%)
CNGB3NP_061971.3 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..121 4/14 (29%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 153..178 5/24 (21%)
Ion_trans 238..453 CDD:278921 54/250 (22%)
Crp 521..>648 CDD:223736 25/143 (17%)
CAP_ED 524..639 CDD:237999 25/131 (19%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 698..776 18/89 (20%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C165145021
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
21.840

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