DRSC/TRiP Functional Genomics Resources

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Protein Alignment Elk and CG6026

DIOPT Version :9

Sequence 1:NP_477009.1 Gene:Elk / 37047 FlyBaseID:FBgn0011589 Length:1284 Species:Drosophila melanogaster
Sequence 2:NP_650778.2 Gene:CG6026 / 42287 FlyBaseID:FBgn0038676 Length:1555 Species:Drosophila melanogaster


Alignment Length:700 Identity:144/700 - (20%)
Similarity:241/700 - (34%) Gaps:232/700 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly   707 YPEYQQQFANDIQHDLTCNLREGYENQDSDIGPSFPLPSISEDDENREEAEEGGKGEKE--NGGG 769
            |.||.::..|..:.....|:...: ..::.|....| |::.::..|....::||.|.|.  |...
  Fly   910 YNEYNRKPQNGPRPSNLPNILPQF-RPNAKISSGHP-PALKQEPGNIRLPQQGGPGPKRPYNPAM 972

  Fly   770 PPSGA---SPLHNISNSPLHATRSPL---------LGMGSPRNQRLH------------------ 804
            .|..|   .|||. .:..:...|.|:         .|.|...|:|::                  
  Fly   973 QPQFAHRRQPLHQ-QHQQMMQKRYPMNRISEYPVGPGPGGDVNRRVYRLPPYGGQNVPYMPDHMY 1036

  Fly   805 -QRGRSLITLRETN----KRH-------RTLNAACSLDRGSFEE--------PEPLEEEQSSGGK 849
             :|.:....||..:    :||       :|::|..:.|   |||        |:|:         
  Fly  1037 PRRPQGAGPLRSVDGYPAERHAPSSEPYKTIDAEAAAD---FEEEDLVINDPPQPV--------- 1089

  Fly   850 RPSLERLDSQVSTLHQDVA-QLSAEVRNAIS------ALQEMTFTSN------AMTSHSSLKFPP 901
            .|..:|..::.:.|...|. |:....:.|:|      ...|:..|::      ..:..|..|..|
  Fly  1090 TPGKDRKGTEETKLEPVVTLQMLQSQKKAVSLPGDDTGAGEIQVTADNDPQEAEASKLSQQKLDP 1154

  Fly   902 ARS---IPNISGVAGTRSGVAVEHGLMGGVLAAAELA----AMQRSSSHPPEVWGRDVQ-LPTSN 958
            :..   .|..|...|...|.|..        |.||..    ::.|.....|.:..:..| |...|
  Fly  1155 SGMYVVFPMKSAEKGQSEGDAPS--------APAEYQNTPFSVIRDQPQEPILKNKKPQSLQQQN 1211

  Fly   959 TA----SSKAPSPVE---PKKTMTSRSSQTDFYRIDFPTFERFVLANPRLVLGLLG--------- 1007
            .|    ..|.|.|:|   |..:.....|||..         ..||..||::.|.:|         
  Fly  1212 KAQHVPKDKFPYPIEKPDPSFSELHPESQTSV---------SGVLVAPRIITGAMGTGTETPIAI 1267

  Fly  1008 ----IEP-AIKNEMDLLQQKQTLQISPLNTI------DECVSPSDHNL----------------- 1044
                .|| ..::|.........|..|.:|.|      :|.:| ||.:|                 
  Fly  1268 AYTPTEPNPFRHEQGQKFSNINLATSVINEIRQDTQTEEGLS-SDFDLRGQNFEKDFMAPFYPSV 1331

  Fly  1045 ----ASSKERLITSSAVPTPGRIYPPLDD----ENSNDFRWTMKHSASHHSCCKSTDALLSPEEQ 1101
                ||....:  :.|.|:...|.|...|    |.:|          .:.:..::|:.....|||
  Fly  1332 SLGGASGAAAI--NPAAPSNWNILPSTTDQAIYEKNN----------INRADVETTEQKKPEEEQ 1384

  Fly  1102 PPISILPVDATPA------PSVQ--------------------EVRSSKRS---------LRKST 1131
            |..|.|..: .|:      |.:|                    |:..:|.:         |..:|
  Fly  1385 PTASALTAE-KPSEMDSFQPQLQGGFKPIYPPGYKHVEQVEQEEIAGAKNAGKDQPIALPLMGTT 1448

  Fly  1132 SGSNSSLSSSSSSSNSCLVSQSTGNLTTTNASVHCSNSSQSVASVATTRRASWKLQHSRSGEYRR 1196
            :..::|.|..||||:|   |.||.:.|:|.::.|....::|..::|||:..:...:.::.     
  Fly  1449 AKPSTSASPVSSSSSS---STSTSSTTSTTSTTHPPGVTKSDVTLATTKAPAISTKPTQR----- 1505

  Fly  1197 LSEATAEYSPPAKTPLPVAGVSYGGDEEE-----SVEL----LGPRRNSR 1237
             .::|.|.|        :|.:.:|.::||     |.||    :|||...|
  Fly  1506 -KKSTFETS--------LAALLFGDEDEEDGARKSAELPKAQVGPRNVPR 1546

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ElkNP_477009.1 PAS 36..132 CDD:238075
PAS_3 41..129 CDD:285623
Ion_trans 285..516 CDD:278921
Ion_trans_2 <455..510 CDD:285168
Crp 583..>650 CDD:223736
CAP_ED 586..715 CDD:237999 3/7 (43%)
CG6026NP_650778.2 PHA03378 <792..975 CDD:223065 14/66 (21%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45445376
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
10.930

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