Protein Alignment Elk and CG42260

DIOPT Version :10

• Sequence 1: NP_477009.1
• Gene: Elk / 37047
• FlyBaseID: FBgn0011589
• Length: 1284
• Species: Drosophila melanogaster
• Sequence 2: NP_001356969.1
• Gene: CG42260 / 37614
• FlyBaseID: FBgn0259145
• Length: 1269
• Species: Drosophila melanogaster
• Alignment Length: 904
• Identity: 195/904 - (21%)
• Similarity: 347/904 - (38%)
• Gaps: 206/904 - (22%)

  Fly   127 ASHKDITHTKMLEMNVNEECDSVFALTAA-----LLGARFRA---GSNAGMLGLGGLPGLGGPAA 183
            ||..|:.|.|....:...      ..|||     |||...|:   ||....|..||...|    |
  Fly   396 ASEMDLLHNKQRNKSRGR------LKTAASGDQPLLGTWNRSTGRGSQDNTLAGGGATSL----A 450

  Fly   184 SDGDTEAGEGNNLDVPAGCNMGRR--RSRAVL-------------YQLS-----------GHYKP 222
            ..|..:.| ||.      ||...|  |||:..             |||.           .|..|
  Fly   451 MGGHNQYG-GNY------CNGTDRYPRSRSQQQGHHNAAQQAHHPYQLQHSASTVSHHPHAHGPP 508

  Fly   223 EKGGVKTKLKLGNNFMHSTEAPFPEY------------------------KTQS--------IKK 255
            .:||..     |....|......|.:                        :|.|        .:|
  Fly   509 SQGGPG-----GPGPPHGGHPHHPHHGGAGSGGGSGPGSHGGQPHHQKPRRTASQRIRAATAARK 568

  Fly   256 SRLILPHYGVFKGIWDWVILVATFYVALMVPYNAAFAKADRQTKV----SDVIVEALFIVDILLN 316
            ...:....|.....|..|:.:|..|...::.|..||.:.:|:|..    .|.:.:.|:::|||.:
  Fly   569 LHFVFDPAGRLCYYWSMVVSMAFLYNFWVIIYRFAFQEINRRTIAIWFCLDYLSDFLYLIDILFH 633

  Fly   317 FRTTFVSRKGEVVSNSKQIAINYLRGW-FALDLLAALPFDHLYASDLYDGEDSHIHLVKLTRLLR 380
            |||.:: ..|.:.:::.::..:|:... |.:|.|..||.|.||.|   .|.:|.:...:|.::.|
  Fly   634 FRTGYL-EDGVLQTDALKLRTHYMNSTIFYIDCLCLLPLDFLYLS---IGFNSILRSFRLVKIYR 694

  Fly   381 LARLLQKIDRYSQH------TAMILTLLMFSFTLAAHWLACIWYVIAVKEYEWFPESNIGWLQLL 439
            ....:.:.:|::.:      ||:|..||:.     .||..|::::|  .:...|...|  |  :.
  Fly   695 FWAFMDRTERHTNYPNLFRSTALIHYLLVI-----FHWNGCLYHII--HKNNGFGSRN--W--VY 748

  Fly   440 AERKNASVAILTTAETYSTALYFTFTSLTSVGFGNVSANTTAEKVFTIIMMLIGALMHAVVFGNV 504
            .:.::|.|     .:.|..:.|:...:||::| ......:..|.||.|:.:|.|.::.|.|.|:|
  Fly   749 HDSESADV-----VKQYLQSYYWCTLALTTIG-DLPKPRSKGEYVFVILQLLFGLMLFATVLGHV 807

  Fly   505 TAIIQRMYSRRSLYESKWRDLKDFVALHNMPKELKQRIEDYFQTSWSLSHGIDIYETLREFPEEL 569
            ..|:..:.:.|..:::|...:|.::.:..:|..|:.::..:|...|......|....:...|::|
  Fly   808 ANIVTSVSAARKEFQAKLDGVKTYMRMRRVPNHLQVKVIKWFDYLWLTQKCSDEERAVSCLPDKL 872

  Fly   570 RGDVSMHLHREIL-QLPIFEAASQGCLKLLSLHIKTNFCAPGEYLIHKGDALNYIYYLCNGSMEV 633
            :.::::::|.:.| ::.||:....|.|..|.|.::....:||:|:..||:....:|.:..|.::|
  Fly   873 KAEIAINVHLDTLKRVEIFQNTEAGFLCELVLRLRPVLFSPGDYICRKGEVGKEMYIVNRGRLQV 937

  Fly   634 IKDD--MVVAILGKGDLVGSDINVHLVATSNGQMTATTNSAGQDVVVRSSSDIKALTYCDLKCIH 696
            :.|:  .|:|.|..|...| :|::..:.|:..:.||:..|.|               |.||..:.
  Fly   938 VADNGKTVMASLKAGSYFG-EISILNMGTAGNRRTASVRSVG---------------YSDLFVLS 986

  Fly   697 MGGLVEVLRLYPEYQQQFANDIQHDLTCNLREGYENQDSDIGPSFPLPSISEDDENREEAEEGGK 761
            ...:.:||:.||..:.:.     ..:.....|.|:....:....|.:.::..........|..|:
  Fly   987 KKDMWDVLKEYPAARVRL-----ESIAVKRLEKYKKAPLEKVKYFNVVAMGRCQSTPGLVESCGR 1046

  Fly   762 GEKENGGGPP--SGASPL----------HNISNSPLH-------------------------ATR 789
            ...|....||  :|||.|          |..|....|                         ||.
  Fly  1047 TSLEEMWLPPATAGASSLMHHHQALQQQHQASQQQPHRQESTQTSSQTHGYSPRSYADRLARATD 1111

  Fly   790 SPLLGMGSPRNQRLHQRGRSLIT----LRETNKRHRT---LNAACSLD--------RGSFEEP-- 837
            ||  ...||......:|.||..|    :|..::...|   .:::..|:        .|....|
  Fly  1112 SP--RSVSPSAHGSEERPRSRTTSHHSIRPQSQPSHTGHICDSSSQLECYGAGVGGAGGGTTPLL 1174

  Fly   838 ---EPLEEEQSSGGKRPSLERLDSQVSTLHQDVAQLSAEVRNAISALQEMTFTSNAMTS 893
               |.||:|...  .|..|..::|:...|:..::|...::.|.::.: ||.....:.||
  Fly  1175 GSHEVLEDEIKR--LRERLHTVESENQALNTKLSQQQWDLENRLAEI-EMQICGVSSTS 1230

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Elk	NP_477009.1	PAS_9	40..133	CDD:463873	3/5 (60%)
		PLN03192	270..>650	CDD:215625	94/393 (24%)
		cNMP	586..716	CDD:197516	33/131 (25%)
CG42260	NP_001356969.1	Ion_trans	581..820	CDD:459842	64/259 (25%)
		CAP_ED	890..1004	CDD:237999	33/129 (26%)