DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Elk and eag

DIOPT Version :10

Sequence 1:NP_477009.1 Gene:Elk / 37047 FlyBaseID:FBgn0011589 Length:1284 Species:Drosophila melanogaster
Sequence 2:NP_001036275.1 Gene:eag / 32428 FlyBaseID:FBgn0000535 Length:1270 Species:Drosophila melanogaster


Alignment Length:1342 Identity:402/1342 - (29%)
Similarity:603/1342 - (44%) Gaps:311/1342 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MP-ARKGLLAPQNTFLDTIATRFDG-THSNFVLGNAQANGNPIVYCSDGFVDLTGYSRAQIMQKG 63
            || .|:||:|||||||:.|..|.:. ..|:|:|.|||....|||||::.|..::||:||::|||.
  Fly     1 MPGGRRGLVAPQNTFLENIIRRSNSQPDSSFLLANAQIVDFPIVYCNESFCKISGYNRAEVMQKS 65

  Fly    64 CS--CHFLYGPDTKEEHKQQIEKSLSNKMELKLEVIFYKK-----------------EGAPFWCL 109
            |.  |.|:||..|.:|...::|.:|.|:.:.:.|::.|||                 :..|.|.|
  Fly    66 CRYVCGFMYGELTDKETVGRLEYTLENQQQDQFEILLYKKNNLQCGCALSQFGKAQTQETPLWLL 130

  Fly   110 FDIVPIKNEKRDVVLFLASHKDITHTKMLEMNVNEECDSVFALTAALLGARFRAGSNAGMLGLGG 174
            ..:.||:||:..|||||.:.:|||   .|:..::.|                   ...|:|||..
  Fly   131 LQVAPIRNERDLVVLFLLTFRDIT---ALKQPIDSE-------------------DTKGVLGLSK 173

  Fly   175 LPGLGGPAASDGDTEAGEGNNLDVPAGCNMGRRRSRAVLYQLSGHYKPEKGGVKTKLKLGNNFMH 239
            ...|.....                        |||    |.|.|....|...|.     :|..|
  Fly   174 FAKLARSVT------------------------RSR----QFSAHLPTLKDPTKQ-----SNLAH 205

  Fly   240 --STEAP-FPEYKTQSIKKSRLILPHYGVFKGIWDWVILVATFYVALMVPYNAAF---AKADRQT 298
              |..|. .|:|:.::.|....||.||..||.|||||||..|||.|:|||||.||   ...|...
  Fly   206 MMSLSADIMPQYRQEAPKTPPHILLHYCAFKAIWDWVILCLTFYTAIMVPYNVAFKNKTSEDVSL 270

  Fly   299 KVSDVIVEALFIVDILLNFRTTFVSRKGEVVSNSKQIAINYLRGWFALDLLAALPFDHLYASDL- 362
            .|.|.||:.:|.:||:|||.||||...|||||:.|.|.:|||:.||.:|||:.||:|...|.|. 
  Fly   271 LVVDSIVDVIFFIDIVLNFHTTFVGPGGEVVSDPKVIRMNYLKSWFIIDLLSCLPYDVFNAFDRD 335

  Fly   363 YDGEDSHIHLVKLTRLLRLARLLQKIDRYSQHTAMILTLLMFSFTLAAHWLACIWYVIAVKEYEW 427
            .||..|....:|:.|||||.|:::|:|||.::.|.:|.||:..:.|.|||||||||.|...:   
  Fly   336 EDGIGSLFSALKVVRLLRLGRVVRKLDRYLEYGAAMLILLLCFYMLVAHWLACIWYSIGRSD--- 397

  Fly   428 FPESNI--GWLQLLAERKNASVAILTTAET-------------YSTALYFTFTSLTSVGFGNVSA 477
             .::.|  .||..||....:..:.:.:.:|             |.||||||.|.:||||||||:|
  Fly   398 -ADNGIQYSWLWKLANVTQSPYSYIWSNDTGPELVNGPSRKSMYVTALYFTMTCMTSVGFGNVAA 461

  Fly   478 NTTAEKVFTIIMMLIGALMHAVVFGNVTAIIQRMYSRRSLYESKWRDLKDFVALHNMPKELKQRI 542
            .|..||||||.||:|.||::|.:||:||.|||:|.|..:.|.....::::|:.||.:||.|.:|:
  Fly   462 ETDNEKVFTICMMIIAALLYATIFGHVTTIIQQMTSATAKYHDMLNNVREFMKLHEVPKALSERV 526

  Fly   543 EDYFQTSWSLSHGIDIYETLREFPEELRGDVSMHLHREIL-QLPIFEAASQGCLKLLSLHIKTNF 606
            .||..::|:::.|:|..:.|...|::::.|:.:||:|::. :.|.|..||.|||:.|::|...:.
  Fly   527 MDYVVSTWAMTKGLDTEKVLNYCPKDMKADICVHLNRKVFNEHPAFRLASDGCLRALAMHFMMSH 591

  Fly   607 CAPGEYLIHKGDALNYIYYLCNGSMEVIKDDMVVAILGKGDLVGSDINVHLVATSNGQMTATTNS 671
            .|||:.|.|.|::::.:.::..||:|||:||.|||||||||:.|...              ..:|
  Fly   592 SAPGDLLYHTGESIDSLCFIVTGSLEVIQDDEVVAILGKGDVFGDQF--------------WKDS 642

  Fly   672 AGQDVVVRSSSDIKALTYCDLKCIHMGGLVEVLRLYPEYQQQFANDIQHDLTCNLREGY------ 730
            |    |.:|:::::|||||||..|....|:|||..|..:...||.::.  ||.|||...      
  Fly   643 A----VGQSAANVRALTYCDLHAIKRDKLLEVLDFYSAFANSFARNLV--LTYNLRHRLIFRKVA 701

  Fly   731 -------------------ENQDSDIGPSFP----LPSISEDDENREEAEEGGKGEKENGGGP-- 770
                               :|||..:...|.    .|.:...  ::|.....|:.:.|.|.|.  
  Fly   702 DVKREKELAERRKNEPQLPQNQDHLVRKIFSKFRRTPQVQAG--SKELVGGSGQSDVEKGDGEVE 764

  Fly   771 -----------------PSGASPLHNISNSPLHATRSPLLGMGSPRNQRLHQRGR-----SLITL 813
                             .:.|:|    |.||   :.||..|..|.|:.|..:.||     |:.:.
  Fly   765 RTKLPAKLTLTEDARILSTAAAP----SPSP---SPSPSSGPPSARSTRASKWGRLLGSSSVDSA 822

  Fly   814 RETNKR---HRTLNAACSLDRGSFEEPEPLEEEQSSGG-------KRPSLERLDSQVSTLHQDVA 868
            .:|:.:   .|:|:|..|| |.|..:........|:||       |.|.|:.  ||.:...||..
  Fly   823 SDTSAKVAVSRSLSARESL-RESTAQARQSSTSSSNGGQGNKVFPKAPKLQA--SQATLARQDTI 884

  Fly   869 QLSAEVRNAISALQEMTFTSNAMTSHSSL-KFPPARSIPNISGVAGTRSGVAVEHGLMGGVLAAA 932
            ....||.::..:.........|..|.::: ..||..:..:.:..||...|    .|..|.|:|..
  Fly   885 DEGGEVDSSPPSRDSRVVIEGAAVSSATVGPSPPVATTSSAAAGAGVSGG----PGSGGTVVAIV 945

  Fly   933 ELA----AMQRSSSHPPEVWGRDVQLPTSNTASSKAPSPVEPKKTMTSRSSQTDFY----RIDFP 989
            ..|    |::|.         |.:::                   .:||::.:|.|    |...|
  Fly   946 TKADRNLALERE---------RQIEM-------------------ASSRATTSDTYDTGLRETPP 982

  Fly   990 TFERFVLANPRLVLGLLGIEPAIKNEMDLLQQKQTLQISPLNTIDECVSPSDHNLA----SSKER 1050
            |     ||...|:..:|.::..::.|:..:||:       :..|::.:......||    |....
  Fly   983 T-----LAQRDLIATVLDMKVDVRLELQRMQQR-------IGRIEDLLGELVKRLAPGAGSGGNA 1035

  Fly  1051 LITSSAVPTPGRIYPPLDDENSNDFRWTMKHSASHHSC--CKSTDALLSPEEQPPISIL--PVDA 1111
            ...||...|||       ||                .|  |.:........:.||.|.:  |||.
  Fly  1036 PDNSSGQTTPG-------DE----------------ICAGCGAGGGGTPTTQAPPTSAVTSPVDT 1077

  Fly  1112 TPAPSVQEVRSSKRSLRKSTSGSNSSLSSSSSSSNSCLVSQSTGNLTTTNASVHCSNSSQSVASV 1176
            .              :..|:.|::.|.|.:.:.:.|.:.......|....|:|..|.....:..:
  Fly  1078 V--------------ITISSPGASGSGSGTGAGAGSAVAGAGGAGLLNPGATVVSSAGGNGLGPL 1128

  Fly  1177 ATTRRASWKLQHSRSGEYRRLSEATAEYSPPAKTPLPVAGVS 1218
            ...:|.|    .||...           :||.:|....||.:
  Fly  1129 MLKKRRS----KSRKAP-----------APPKQTLASTAGTA 1155

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ElkNP_477009.1 PAS_9 40..133 CDD:463873 40/111 (36%)
PLN03192 270..>650 CDD:215625 176/399 (44%)
cNMP 586..716 CDD:197516 49/129 (38%)
eagNP_001036275.1 PAS_9 40..155 CDD:463873 42/117 (36%)
Ion_trans 238..499 CDD:459842 127/264 (48%)
CAP_ED 571..682 CDD:237999 48/128 (38%)

Return to query results.
Submit another query.