DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Elk and KCNH4

DIOPT Version :10

Sequence 1:NP_477009.1 Gene:Elk / 37047 FlyBaseID:FBgn0011589 Length:1284 Species:Drosophila melanogaster
Sequence 2:NP_036417.1 Gene:KCNH4 / 23415 HGNCID:6253 Length:1017 Species:Homo sapiens


Alignment Length:1087 Identity:474/1087 - (43%)
Similarity:620/1087 - (57%) Gaps:183/1087 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MPARKGLLAPQNTFLDTIATRFDGTHSNFVLGNAQ-ANGNPIVYCSDGFVDLTGYSRAQIMQKGC 64
            ||..|||||||||||||||||||||||||:|.||| ..|.|||||||||.:||||.|.::|||.|
Human     1 MPVMKGLLAPQNTFLDTIATRFDGTHSNFLLANAQGTRGFPIVYCSDGFCELTGYGRTEVMQKTC 65

  Fly    65 SCHFLYGPDTKEEHKQQIEKSLSNKMELKLEVIFYKKEGAPFWCLFDIVPIKNEKRDVVLFLASH 129
            ||.|||||:|.|...|::.|:|....|.:.|:.||:|:|:.||||.|::|||||..:|||||.|.
Human    66 SCRFLYGPETSEPALQRLHKALEGHQEHRAEICFYRKDGSAFWCLLDMMPIKNEMGEVVLFLFSF 130

  Fly   130 KDITHTKMLEMNVNEECDSVFALTAALLGARFRAGSNAGMLGLGGLPGLGGPAASDGDTEAGEGN 194
            ||||.:                                      |.||| ||....||  :...|
Human   131 KDITQS--------------------------------------GSPGL-GPQGGRGD--SNHEN 154

  Fly   195 NLDVPAGC---NMGRRRSRAVLYQLSGHY-KPEKGGVKTKLKLGNNFMHSTEAPFPEYKTQSIKK 255
            :|......   ...|||||.||::|:||: :..:||:|     .||.:...:...||||..|:..
Human   155 SLGRRGATWKFRSARRRSRTVLHRLTGHFGRRGQGGMK-----ANNNVFEPKPSVPEYKVASVGG 214

  Fly   256 SRLILPHYGVFKGIWDWVILVATFYVALMVPYNAAFAKAD------RQTKVSDVIVEALFIVDIL 314
            ||.:|.||.|.|.|||.:||:||||||:.||||..|:..|      |.|.|||:.||.|||:||:
Human   215 SRCLLLHYSVSKAIWDGLILLATFYVAVTVPYNVCFSGDDDTPITSRHTLVSDIAVEMLFILDII 279

  Fly   315 LNFRTTFVSRKGEVVSNSKQIAINYLRGWFALDLLAALPFDHLYASDLYDGEDSHIHLVKLTRLL 379
            ||||||:||:.|:|:|..:.|.::||..||.:||:||||||.||..::  ...|.:||:|..|||
Human   280 LNFRTTYVSQSGQVISAPRSIGLHYLATWFFIDLIAALPFDLLYIFNI--TVTSLVHLLKTVRLL 342

  Fly   380 RLARLLQKIDRYSQHTAMILTLLMFSFTLAAHWLACIWYVIAVKEYE------WFPESNIGWLQL 438
            ||.|||||::||||.:|::|||||..|.|.|||:|||||||..:|.|      |    :||||..
Human   343 RLLRLLQKLERYSQCSAVVLTLLMSVFALLAHWMACIWYVIGRREMEANDPLLW----DIGWLHE 403

  Fly   439 LAER-----KNASVAILTTAETYSTALYFTFTSLTSVGFGNVSANTTAEKVFTIIMMLIGALMHA 498
            |.:|     .|.||...:....|..|||||.:||||||||||.|||.|||:|:|..|||||||||
Human   404 LGKRLEVPYVNGSVGGPSRRSAYIAALYFTLSSLTSVGFGNVCANTDAEKIFSICTMLIGALMHA 468

  Fly   499 VVFGNVTAIIQRMYSRRSLYESKWRDLKDFVALHNMPKELKQRIEDYFQTSWSLSHGIDIYETLR 563
            ||||||||||||||||||||.|:.:|||||:.:|.:|:.||||:.:||||:|:::.|||..|.||
Human   469 VVFGNVTAIIQRMYSRRSLYHSRMKDLKDFIRVHRLPRPLKQRMLEYFQTTWAVNSGIDANELLR 533

  Fly   564 EFPEELRGDVSMHLHREILQLPIFEAASQGCLKLLSLHIKTNFCAPGEYLIHKGDALNYIYYLCN 628
            :||:|||.|::|||:|||||||:|.|||:|||:.|||||||:||||||||:.:||||...||:|:
Human   534 DFPDELRADIAMHLNREILQLPLFGAASRGCLRALSLHIKTSFCAPGEYLLRRGDALQAHYYVCS 598

  Fly   629 GSMEVIKDDMVVAILGKGDLVGSDINVHLVATSNGQMTATTNSAGQDVVVRSSSDIKALTYCDLK 693
            ||:||::|:||:||||||||:|:||      ...||....  .|..:.|:::|:|:||||||.|:
Human   599 GSLEVLRDNMVLAILGKGDLIGADI------PEPGQEPGL--GADPNFVLKTSADVKALTYCGLQ 655

  Fly   694 CIHMGGLVEVLRLYPEYQQQFANDIQHDLTCNLREGYEN---------------QDSDIGPSF-- 741
            .:...||.|||||||||...|...:..|||.|||:|.:.               :...:|.|.  
Human   656 QLSSRGLAEVLRLYPEYGAAFRAGLPRDLTFNLRQGSDTSGLSRFSRSPRLSQPRSESLGSSSDK 720

  Fly   742 PLPSISEDDENREEAEEGGKGEKENGGGP---------------PSGA---------SPLHNISN 782
            .||||:       |||.|.    |.||||               |.|:         .|...:.:
Human   721 TLPSIT-------EAESGA----EPGGGPRPRRPLLLPNLSPARPRGSLVSLLGEELPPFSALVS 774

  Fly   783 SP-LHATRSPLLG--------MGSPRNQRLHQRGRSLI----TLRETNKRHRTL----NAACSLD 830
            || |..:.||.|.        .|.||.....:..:.||    |....:...|.:    ::..:.:
Human   775 SPSLSPSLSPALAGQGHSASPHGPPRCSAAWKPPQLLIPPLGTFGPPDLSPRIVDGIEDSGSTAE 839

  Fly   831 RGSF------EEPEPLEEEQSSGGKRPSLE-------------RLDSQVSTLHQDVAQLSAEVRN 876
            ..||      |.|.|..:...: |.|||.|             ||:.::|.|:|:|:|||.|:|:
Human   840 APSFRFSRRPELPRPRSQAPPT-GTRPSPELASEAEEVKEKVCRLNQEISRLNQEVSQLSRELRH 903

  Fly   877 AISALQEMTFTSNAMTSHSSLKFPPARSI--PNISGVAGTRSGVAVEHGLMGGVLAAAELAAMQ- 938
            .:..||............:....||...:  |.:|..| :|...:::...:..|...|.:..|: 
Human   904 IMGLLQARLGPPGHPAGSAWTPDPPCPQLRPPCLSPCA-SRPPPSLQDTTLAEVHCPASVGTMET 967

  Fly   939 -------RSSSHPPEVWGRDVQLPTSNTASSKAPSPVEPKKTMTSRS 978
                   |.|..||.....| .|..|....:..|:|...:.:..|||
Human   968 GTALLDLRPSILPPYPSEPD-PLGPSPVPEASPPTPSLLRHSFQSRS 1013

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ElkNP_477009.1 PAS_9 40..133 CDD:463873 54/92 (59%)
PLN03192 270..>650 CDD:215625 238/396 (60%)
cNMP 586..716 CDD:197516 72/129 (56%)
KCNH4NP_036417.1 PRK13559 41..>179 CDD:237427 73/178 (41%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 138..157 8/21 (38%)
PLN03192 177..>620 CDD:215625 259/453 (57%)
Selectivity filter. /evidence=ECO:0000250 439..444 4/4 (100%)
cNMP-binding domain. /evidence=ECO:0000255|PROSITE-ProRule:PRU00060 556..620 44/63 (70%)
cNMP_binding 578..667 CDD:459637 48/96 (50%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 691..749 16/68 (24%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 772..803 9/30 (30%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 821..875 11/54 (20%)
PHA02682 838..>999 CDD:177464 39/163 (24%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 971..1017 12/44 (27%)

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