Protein Alignment Elk and che-6

DIOPT Version :9

• Sequence 1: NP_477009.1
• Gene: Elk / 37047
• FlyBaseID: FBgn0011589
• Length: 1284
• Species: Drosophila melanogaster
• Sequence 2: NP_001343628.1
• Gene: che-6 / 182823
• WormBaseID: WBGene00000487
• Length: 655
• Species: Caenorhabditis elegans
• Alignment Length: 569
• Identity: 128/569 - (22%)
• Similarity: 239/569 - (42%)
• Gaps: 121/569 - (21%)

  Fly   260 LPHYGVFKGIWDWVILVATFYVALMVPYN----AAFAKADRQTK------VSDVIVEALFIVDIL 314
            :|....:..||       :|:|:..|.||    ..|..||.:|:      ..:|:.:.:|||||.
 Worm    61 VPFNSKYYYIW-------SFFVSFGVMYNMFAMVIFIFADIKTQYFWNWIFLNVMFDMVFIVDIF 118

  Fly   315 LNFRTTFVSRKGEVVSNSKQIAINYLRGWF-----ALDLLAALPFDHLYASDLYDGEDSHIHLVK 374
            :..|.|:: .:||.|.|:|::..||   :|     |.|:...||.|.|...|     || :.||:
 Worm   119 VQSRLTYL-HEGEEVKNTKKLRKNY---FFQKLKVANDIFCLLPLDFLLFFD-----DS-MSLVR 173

  Fly   375 LTRLLRLARLLQKIDRYSQHT----AMILTLLMFSFTLAAHWLACIWYVIAVKE----------- 424
            ..|::::.||:..:.|..|.|    |..:.||..|..:..||.||::::.::.|
 Worm   174 TIRIVKVIRLMDFVQRTQQQTTFPRAFKIILLAVSCIVLFHWNACLYFLFSLYEGITEESQTEFG 238

  Fly   425 -----------------YE---WFPESNIGWLQL----------LAERKNASVAILTT---AETY 456
                             |:   ||.|.....|.|          :||.........||   :..|
 Worm   239 FSYYKVFEPVFPTCQAYYDENCWFGEDIDHTLDLDDVRDSYKKEMAEYWKDKHYRWTTGNFSREY 303

  Fly   457 STALYFTFTSLTSVGFGNVSANTTAEKVFTIIMMLIGALMHAVVFGNVTAIIQRMYSRRSLYESK 521
            |.::|::..::|:.| .....:|:::....:...|||.|:.|.:.|:|.:::.:|    |...::
 Worm   304 SMSIYWSALTITTCG-QQPWPSTSSQNSLEVFDTLIGVLVFATIIGSVGSVVTQM----SQTVNE 363

  Fly   522 WRDLKDFVALHNMPKELKQRIEDYFQT--SWSLSHG-IDIYE-TLREFPEELRGDVSMHLHREIL 582
            :|.:.|.:..:...:|:...|::...:  .:.::|. :|..| .|...|..|:.:::.:||.|.|
 Worm   364 FRQMMDGIKFYMKYREVNSAIQERALSCFMYLMAHNQLDDEEGILSLLPPRLQANIAANLHMETL 428

  Fly   583 Q-LPIFEAASQGCLKLLSLHIKTNFCAPGEYLIHKGDALNYIYYLCNGSMEVIKDDMVVAILGK- 645
            | :.||.......:..:.|.:|....:|.:||..|.:....::.:..|.:.||.||     .|:
 Worm   429 QNIQIFALCESRFMHEVVLLVKQQVFSPNDYLCRKNEKAKELFIVKKGKLRVIDDD-----TGEE 488

  Fly   646 -GDLV-GSDINVHLVATSNGQMTATTNSAGQDVVVRSSSDIKALTYCDLKCIHMGGLVEVLRLYP 708
             |:|. |:......:....|.:..|          |....::::.:.|:..::..   :|.||..
 Worm   489 MGELTEGATFGELSIVYVKGNLLGT----------RRCCSLQSVGFSDIYVLYRD---DVSRLLQ 540

  Fly   709 EYQQQF------ANDIQHDL----TCNLREGYENQDSDIGPSFPLPSIS 747
            |:.|::      |.::.|..    |..|.|..:..|.:......|..:|
 Worm   541 EFPQEYKTIVMNARNLLHSRGLLETTELGEMCDPSDHEEADDLVLEEMS 589

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Elk	NP_477009.1	PAS	36..132	CDD:238075
		PAS_3	41..129	CDD:285623
		Ion_trans	285..516	CDD:278921	73/293 (25%)
		Ion_trans_2	<455..510	CDD:285168	13/54 (24%)
		Crp	583..>650	CDD:223736	17/70 (24%)
		CAP_ED	586..715	CDD:237999	26/137 (19%)
che-6	NP_001343628.1	Ion_trans	68..>245	CDD:366146	53/193 (27%)
		PLN03192	<303..>581	CDD:215625	62/300 (21%)
		CAP_ED	433..544	CDD:237999	25/128 (20%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	1	0.930	-	-		C160158452
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	2	1.840