DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Elk and LOC1278162

DIOPT Version :10

Sequence 1:NP_477009.1 Gene:Elk / 37047 FlyBaseID:FBgn0011589 Length:1284 Species:Drosophila melanogaster
Sequence 2:XP_061512391.1 Gene:LOC1278162 / 1278162 VectorBaseID:AGAMI1_008384 Length:610 Species:Anopheles gambiae


Alignment Length:596 Identity:108/596 - (18%)
Similarity:220/596 - (36%) Gaps:136/596 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly   228 KTKLKLGNNFMHSTEAPFPEYKTQSIKKSRLILPHYGVFKGIWDWVI-LVATFYVALMVPYNAAF 291
            :||:...|..:.....||             |:..:..|:..|:.|: .|.|.:   :|....||
Mosquito    60 RTKIAAENERLVRELPPF-------------IVHPFSSFRKCWEMVMYFVLTLH---LVTLAFAF 108

  Fly   292 AKADRQT-------KVSDVIVEALFIVDILLNFRTTFVSRKGEVVSNSKQIAINYLRGWFALD-L 348
            |.|...:       ::.|.::.|:..::..|...|.:|| :||||....:|....:|.|..:: :
Mosquito   109 AFAPHLSYGVLSGIQLFDCVLCAMLGMEFALKLITGYVS-QGEVVLEPSRIVRYRMRWWNVVNRM 172

  Fly   349 LAALPF----DHLYASDLYDGEDSHIHLVKLTRLLRLARLLQKIDRY-----------SQHTAMI 398
            |..:|:    |.|..:...|....::.||....||.:.| .:.|:.|           |:....:
Mosquito   173 LLFVPYVLLLDELVRAFYQDAVTIYLCLVIYLYLLCVWR-FRSINWYFAIVARSLFGLSEKQIRL 236

  Fly   399 LTLLMFSFTLAAHWLACIWYVIAV--------KEYE--------W----------FPESNIGWLQ 437
            |..:|.:. ...||.:|:.|::.:        ..:|        |          :|.::...|.
Mosquito   237 LEPIMDTL-YVLHWTSCLLYIVPLLTLSLLGDNAFEANFLVDVLWSHDQQRDAYHYPITHRNRLP 300

  Fly   438 LLAERK--------------NASVAILTTAE-------TYSTALYFTFTSLTSVGFGNVSANTTA 481
            .|::.:              ....|:|...|       .|..||..|| .::..|..::|.:...
Mosquito   301 PLSDLRAYLQQHLPKMSICAEFMAALLDDVEHNVSVTYRYLRALMITF-KISVQGGHSLSVSRHF 364

  Fly   482 EKVFTIIMMLIGA----------LMHAVVFGNVTAIIQRMYSRRSLYESKWRDLKDFVALHNMPK 536
            ...:|..::|:|.          |:..::..:.:         .:.|:....::..|.....:.:
Mosquito   365 LHEWTQSLLLLGGWIWSTYILLLLIRTIITADAS---------ETQYDEILNEIDAFCGRMRLSE 420

  Fly   537 ELKQRIEDYFQTSWSLSHGIDIYETLREFPEELRGDVSMHLHRE--ILQLPIFEAASQGCLKLLS 599
            .|::::..:|...:.: |..|:.....:..:.||..|.|.:..|  :.:..:|.......|:.::
Mosquito   421 SLRRKMSRHFACHYRM-HYFDVRPIRMQASDNLRRTVLMEIAFEPFLTRSDVFHDLPAYVLQDIA 484

  Fly   600 LHIKTNFCAPGEYLIHKGDALNYIYYLCNGSMEVIKDDMVVAILGKGDLVGSDINVHLVATSNGQ 664
            ..::.......:.::..|.|.:.:::|..|:..|...|.|.  ||           ||:..:|..
Mosquito   485 DQLRFELYLENDTILAVGSAADTMFFLAMGTAAVYTRDGVE--LG-----------HLIDGANFG 536

  Fly   665 MTATTNSAGQDVVVRSSSDIKALTYCDLKCIHMGGLVEVLR----LYPEYQQQFANDIQHDLTCN 725
            ..|...:..|..|     .:.||..|::..:......:::|    |.....:|....|| |.:.:
Mosquito   537 AIALFRTDAQRTV-----SVVALEVCEVYRLERASFQKLMRPHSYLLGLVVKQAEKRIQ-DRSVS 595

  Fly   726 LREGYENQDSD 736
            |:|..:.|..|
Mosquito   596 LQEFPDEQYYD 606

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ElkNP_477009.1 PAS_9 40..133 CDD:463873
PLN03192 270..>650 CDD:215625 82/462 (18%)
cNMP 586..716 CDD:197516 23/133 (17%)
LOC1278162XP_061512391.1 None
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.