DRSC/TRiP Functional Genomics Resources

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Protein Alignment Elk and CNGA2

DIOPT Version :10

Sequence 1:NP_477009.1 Gene:Elk / 37047 FlyBaseID:FBgn0011589 Length:1284 Species:Drosophila melanogaster
Sequence 2:NP_005131.1 Gene:CNGA2 / 1260 HGNCID:2149 Length:664 Species:Homo sapiens


Alignment Length:559 Identity:134/559 - (23%)
Similarity:234/559 - (41%) Gaps:122/559 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly   180 GPAASDGDTEAGEGNNLDVPAGCNMGRRRSRAVLYQLSGHYKPEKGGVKTKLKLGNNFMHSTEAP 244
            ||......|:.|:|                       .|....|..|.|.|.:|           
Human   100 GPELQTVTTQEGDG-----------------------KGDKDGEDKGTKKKFEL----------- 130

  Fly   245 FPEYKTQSIKKSRLILPHYGVFKGIWDWVILVATFYVALMVPYNAAFAKADRQT------KVSDV 303
                         .:|...|.:...|.:||.:...|...::...|.|  :|.|.      .|.|.
Human   131 -------------FVLDPAGDWYYCWLFVIAMPVLYNWCLLVARACF--SDLQKGYYLVWLVLDY 180

  Fly   304 IVEALFIVDILLNFRTTFVSRKGEVVSNSKQIAINYLRG-WFALDLLAALPFDHLY-ASDLYDGE 366
            :.:.::|.|:.:..||.|: .:|.:|.::|::..||:.. .|.||:.:.:|.|.:| |.|::..|
Human   181 VSDVVYIADLFIRLRTGFL-EQGLLVKDTKKLRDNYIHTLQFKLDVASIIPTDLIYFAVDIHSPE 244

  Fly   367 DSHIHLVKLTRLLRLARLLQKIDRYSQHT-----AMILTLLMFSFTLAAHWLACIWYVIAVK--- 423
                  |:..|||..||:.:..||....|     ..|..|:::...: .||.|||:|.|:..   
Human   245 ------VRFNRLLHFARMFEFFDRTETRTNYPNIFRISNLVLYILVI-IHWNACIYYAISKSIGF 302

  Fly   424 -----EYEWFPESNIGWLQLLAERKNASVAILTTAETYSTALYFTFTSLTSVGFGNVSANT---- 479
                 .|....:...|:|                |..|...||::..:||::|      .|    
Human   303 GVDTWVYPNITDPEYGYL----------------AREYIYCLYWSTLTLTTIG------ETPPPV 345

  Fly   480 -TAEKVFTIIMMLIGALMHAVVFGNVTAIIQRMYSRRSLYESKWRDLKDFVALHNMPKELKQRIE 543
             ..|.:|.|...|||.|:.|.:.|||.::|..|.:.|:.:::|...:|.::....:.|.::.::.
Human   346 KDEEYLFVIFDFLIGVLIFATIVGNVGSMISNMNATRAEFQAKIDAVKHYMQFRKVSKGMEAKVI 410

  Fly   544 DYFQTSWSLSHGIDIYETLREFPEELRGDVSMHLHREIL-QLPIFEAASQGCLKLLSLHIKTNFC 607
            .:|...|:....:|..|.|:..|.:||.::::::|...| ::.||.....|.|..|.|.::....
Human   411 RWFDYLWTNKKTVDEREILKNLPAKLRAEIAINVHLSTLKKVRIFHDCEAGLLVELVLKLRPQVF 475

  Fly   608 APGEYLIHKGDALNYIYYLCNGSMEVIKDDMVV--AILGKGDLVGSDINVHLVATSNGQMTATTN 670
            :||:|:..|||....:|.:..|.:.|:.||.|.  |:|..|...| :|::             .|
Human   476 SPGDYICRKGDIGKEMYIIKEGKLAVVADDGVTQYALLSAGSCFG-EISI-------------LN 526

  Fly   671 SAGQDVVVRSSSDIKALTYCDLKCIHMGGLVEVLRLYPE 709
            ..|..:..|.:::|::|.|.||.|:....|:|.:..||:
Human   527 IKGSKMGNRRTANIRSLGYSDLFCLSKDDLMEAVTEYPD 565

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ElkNP_477009.1 PAS_9 40..133 CDD:463873
PLN03192 270..>650 CDD:215625 106/408 (26%)
cNMP 586..716 CDD:197516 36/126 (29%)
CNGA2NP_005131.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..49
Ion_trans 140..382 CDD:459842 71/273 (26%)
Ion conduction pathway. /evidence=ECO:0000250|UniProtKB:P29973 270..378 32/130 (25%)
Selectivity filter. /evidence=ECO:0000250|UniProtKB:P29973 337..340 1/8 (13%)
C-linker. /evidence=ECO:0000250|UniProtKB:P29973 380..456 15/75 (20%)
CAP_ED 454..570 CDD:237999 36/126 (29%)
Cyclic nucleotide-binding domain. /evidence=ECO:0000250|UniProtKB:P29973 460..580 34/120 (28%)
CLZ 570..637 CDD:465160
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 641..664
Blue background indicates that the domain is not in the aligned region.

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