DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Elk and CNGB1

DIOPT Version :9

Sequence 1:NP_477009.1 Gene:Elk / 37047 FlyBaseID:FBgn0011589 Length:1284 Species:Drosophila melanogaster
Sequence 2:NP_001288.3 Gene:CNGB1 / 1258 HGNCID:2151 Length:1251 Species:Homo sapiens


Alignment Length:903 Identity:177/903 - (19%)
Similarity:329/903 - (36%) Gaps:215/903 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly    72 PDTKEEHKQQIEKSLSNKMELKLEVIFYKKEGAPFWCLFDIVPIKNEKRDVVLFLASHKDITHTK 136
            |.||:..:.|:|.:.::...|..|      |..|...|....|.|::    .|.:.|....||.|
Human   459 PATKQHPEVQVEDTDADSCPLMAE------ENPPSTVLPPPSPAKSD----TLIVPSSASGTHRK 513

  Fly   137 MLEMNVNEECDSVFALTAALLGARFRAGSNAGMLGLGGLPGLGGPAASDGDTEAGEGNNLDVPAG 201
            .|. :.::|.:.:.||:.|  .:...|.|:...           |..:||...|..      .|.
Human   514 KLP-SEDDEAEELKALSPA--ESPVVAWSDPTT-----------PKDTDGQDRAAS------TAS 558

  Fly   202 CNMGRRRSRAVLYQLSGHYKPEKGGVKTKLKLGNNFMHSTEAPFP-------------------- 246
            .|......|  |.:|...:|.....||.|| :..:.....|:|.|                    
Human   559 TNSAIINDR--LQELVKLFKERTEKVKEKL-IDPDVTSDEESPKPSPAKKAPEPAPDTKPAEAEP 620

  Fly   247 ------------EYKTQSIKKSRL---ILPHYGVFKGIWDWVILVATFYVALMVPYNAAFAKADR 296
                        ::|.:..||.:.   |.|...:...:|.:.:::|..:...::|...||   ..
Human   621 VEEEHYCDMLCCKFKHRPWKKYQFPQSIDPLTNLMYVLWLFFVVMAWNWNCWLIPVRWAF---PY 682

  Fly   297 QTK-------VSDVIVEALFIVDI-LLNFRTTFVSRKGEVVSNSKQIAINYLRG-WFALDLLAAL 352
            ||.       :.|.:.:.::.:|| :...|..|| |.|:::::.|.:..|||:. .|.:|||:.|
Human   683 QTPDNIHHWLLMDYLCDLIYFLDITVFQTRLQFV-RGGDIITDKKDMRNNYLKSRRFKMDLLSLL 746

  Fly   353 PFDHLYASDLYDGEDSHIHLVKLTRLL----------RLARLLQK--IDRYSQHTAMILTLLMFS 405
            |.|.||   |..|.:.   |::|.|.|          ||..:|.|  :.|..:.||.:|..|   
Human   747 PLDFLY---LKVGVNP---LLRLPRCLKYMAFFEFNSRLESILSKAYVYRVIRTTAYLLYSL--- 802

  Fly   406 FTLAAHWLACIWYVIAVKEYEWFPESNIGWLQLLAERKNASVAILTTAETYSTALYFTFTSLTSV 470
                 |..:|::|                |........:..........:|....||...:|.::
Human   803 -----HLNSCLYY----------------WASAYQGLGSTHWVYDGVGNSYIRCYYFAVKTLITI 846

  Fly   471 GFGNVSANTTAEKVFTIIMMLIGALMHAVVFGNVTAIIQRMYSRRSLYESKWRDLKDFVALHNMP 535
            | |.....|..|.||.::....|....:|:.|.:..::....:.::.|.|.......::..:.:|
Human   847 G-GLPDPKTLFEIVFQLLNYFTGVFAFSVMIGQMRDVVGAATAGQTYYRSCMDSTVKYMNFYKIP 910

  Fly   536 KELKQRIEDYFQTSWSLSHGIDIYETLREFPEELRGDVSMHLHREIL-QLPIFEAASQGCLKLLS 599
            |.::.|::.:::.:|.....:|..|.:.:.|:::|.|:::.::..|: ::.:|:...:..:..:.
Human   911 KSVQNRVKTWYEYTWHSQGMLDESELMVQLPDKMRLDLAIDVNYNIVSKVALFQGCDRQMIFDML 975

  Fly   600 LHIKTNFCAPGEYLIHKGDALNYIYYLCNGSMEVI---KDDMVVAILGKGDLVGSDINVHLVATS 661
            ..:::....|.:|:..||:....:|.:..|.::|:   ....|:..|..|.:.|   .:.|:|..
Human   976 KRLRSVVYLPNDYVCKKGEIGREMYIIQAGQVQVLGGPDGKSVLVTLKAGSVFG---EISLLAVG 1037

  Fly   662 NGQMTATTNSAGQDVVVRSSSDIKALTYCDLKCIHMGGLVEVLRLYPEYQQQFANDIQHDLTCNL 726
            .|.              |.::::.|..:.:|..:....|.|:|..|||.|:......:..|..|.
Human  1038 GGN--------------RRTANVVAHGFTNLFILDKKDLNEILVHYPESQKLLRKKARRMLRSNN 1088

  Fly   727 REGYENQDSDIGPSFPLPSI-------------------------------------SEDDENRE 754
            :...|.....:.|....|.:                                     ::..|..|
Human  1089 KPKEEKSVLILPPRAGTPKLFNAALAMTGKMGGKGAKGGKLAHLRARLKELAALEAAAKQQELVE 1153

  Fly   755 EAE--EGGKGEKENGGGPPSGASPLHNISNSPLHATRSPLLGMGSPRNQRLHQRGRSLITLRETN 817
            :|:  :..||| |....|.....|....::.|  |.|:|....|||.:.                
Human  1154 QAKSSQDVKGE-EGSAAPDQHTHPKEAATDPP--APRTPPEPPGSPPSS---------------- 1199

  Fly   818 KRHRTLNAACSLDRGSFEEPEPLEEEQ------SSGGKRPSLERLDSQVSTLHQDVAQ 869
                  ....||.|...||..|.|.|:      .|.|..|..:.|..::....::.|:
Human  1200 ------PPPASLGRPEGEEEGPAEPEEHSVRICMSPGPEPGEQILSVKMPEEREEKAE 1251

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ElkNP_477009.1 PAS 36..132 CDD:238075 14/59 (24%)
PAS_3 41..129 CDD:285623 13/56 (23%)
Ion_trans 285..516 CDD:278921 58/251 (23%)
Ion_trans_2 <455..510 CDD:285168 13/54 (24%)
Crp 583..>650 CDD:223736 11/69 (16%)
CAP_ED 586..715 CDD:237999 25/131 (19%)
CNGB1NP_001288.3 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..75
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 121..151
Trypan_PARP <171..257 CDD:114603
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 172..252
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 314..561 29/131 (22%)
IQ-like 568..578 3/9 (33%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 585..619 5/34 (15%)
Ion_trans 674..881 CDD:278921 58/241 (24%)
Crp 956..>1093 CDD:223736 28/153 (18%)
CAP_ED 962..1071 CDD:237999 22/125 (18%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1151..1251 27/124 (22%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C165145022
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
21.840

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