Sequence 1: | NP_477009.1 | Gene: | Elk / 37047 | FlyBaseID: | FBgn0011589 | Length: | 1284 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_446137.1 | Gene: | Hcn3 / 114245 | RGDID: | 620691 | Length: | 780 | Species: | Rattus norvegicus |
Alignment Length: | 887 | Identity: | 203/887 - (22%) |
---|---|---|---|
Similarity: | 345/887 - (38%) | Gaps: | 217/887 - (24%) |
- Green bases have known domain annotations that are detailed below.
Fly 181 PAASDGD--TEAGEGNNLDVPAGCNMGRRRSRAVLYQLSGHYKPEKGGVKTKLKLG-------NN 236
Fly 237 FMHSTEAPFPEYKTQSIKKSRL------ILPHYGVFKGIWDWVILVATFYVALMVPYNAAFAKAD 295
Fly 296 RQTK--VSDVIVEALFIVDILLNFRTTFVSRKG-EVVSNSKQIAINYLRGWFALDLLAALPFDHL 357
Fly 358 Y-ASDLYDGEDSHIH-------------LVKLTRLLRLARLLQKIDRYSQHTAMILTL------- 401
Fly 402 --LMFSFTLAAHWLACIWYVIAVKEYEWFPES---------NIGWLQLLAERKNASVAILTTAET 455
Fly 456 YSTALYFTFTSLTSVGFGNVSANTTAEKVFTIIMMLIGALMHAVVFGNVTAIIQRMYSRRSLYES 520
Fly 521 KWRDLKDFVALHNMPKELKQRIEDYFQTSWSLSHGIDIYETLREFPEE-LRGDVSMHLHREIL-- 582
Fly 583 -------QLPIFEAASQGCLKLLSLHIKTNFCAPGEYLIHKGDALNYIYYLCNGSMEVIKDDMVV 640
Fly 641 AILGKGDLVGSDINVHLVATSNGQMTATTNSAGQDVVVRSSSDIKALTYCDLKCIHMGGLVEVLR 705
Fly 706 LYPEYQQQFANDIQHDLTCNLREGYENQDSDIGPSFPLPSISEDDENREEAEEGGKGEKE----- 765
Fly 766 -------NGGGPPSGASPLHNISNSP------LHATRSPLLGMGSPRNQRL---HQRGRSLITLR 814
Fly 815 ETNKRHRTLNAACSLDRGSFEEPEPLEEEQS----SGGKRPSLERLDS-QVSTLHQDVAQLSAEV 874
Fly 875 RNAISALQEMTFTSNAMTSHSSLKFPPARSIPNISGVAGTRSGVAVEHGLMGGVLAAAELAAMQR 939
Fly 940 SS--SHPPEVWGRDVQLPTSNTASSKAPSPVEPKKTMTSRSS 979 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Elk | NP_477009.1 | PAS | 36..132 | CDD:238075 | |
PAS_3 | 41..129 | CDD:285623 | |||
Ion_trans | 285..516 | CDD:278921 | 63/265 (24%) | ||
Ion_trans_2 | <455..510 | CDD:285168 | 15/54 (28%) | ||
Crp | 583..>650 | CDD:223736 | 11/66 (17%) | ||
CAP_ED | 586..715 | CDD:237999 | 22/128 (17%) | ||
Hcn3 | NP_446137.1 | Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 1..47 | 14/52 (27%) | |
Involved in subunit assembly. /evidence=ECO:0000250 | 45..90 | 10/47 (21%) | |||
Ion_trans_N | 48..90 | CDD:285597 | 10/44 (23%) | ||
Ion_trans | 110..357 | CDD:278921 | 63/265 (24%) | ||
Interaction with KCTD3. /evidence=ECO:0000250|UniProtKB:O88705 | 353..780 | 113/506 (22%) | |||
Crp | 421..>557 | CDD:223736 | 28/158 (18%) | ||
CAP_ED | 427..535 | CDD:237999 | 22/127 (17%) | ||
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 549..569 | 6/29 (21%) | |||
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 687..780 | 29/114 (25%) | |||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 1 | 0.930 | - | - | C166338706 | |
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E1_KOG0498 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
4 | 3.740 |