DRSC/TRiP Functional Genomics Resources

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Protein Alignment Elk and cnga2

DIOPT Version :10

Sequence 1:NP_477009.1 Gene:Elk / 37047 FlyBaseID:FBgn0011589 Length:1284 Species:Drosophila melanogaster
Sequence 2:XP_004916824.1 Gene:cnga2 / 100494874 XenbaseID:XB-GENE-992758 Length:675 Species:Xenopus tropicalis


Alignment Length:576 Identity:144/576 - (25%)
Similarity:254/576 - (44%) Gaps:110/576 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly   269 IWDWVILVA--------TFYVALMVPYNAAFAKADRQTKVSDVIVEALFIVDILLNFRTTFVSRK 325
            :::|.:||.        |.||||..              ..|.|.:.::|.||::.|||.|: .:
 Frog   165 LYNWFLLVVRACFDDLQTSYVALWF--------------TLDYICDVIYIADIVIRFRTGFL-EQ 214

  Fly   326 GEVVSNSKQIAINYLRG-WFALDLLAALPFDHLYASDL-YDGEDSHIHLVKLTRLLRLARLLQKI 388
            |.:|.:.|.::.||:|. .|.||:::.||      :|| |.....|...::..|||...|:.:..
 Frog   215 GLLVRDPKTLSNNYIRTLQFKLDIISILP------TDLGYFAVGIHRPELRFNRLLHFPRMFECF 273

  Fly   389 DRYSQHTA-----MILTLLMFSFTLAAHWLACIWY----VIAVKEYEW-FPESNIGWLQLLAERK 443
            |:....|:     .|..|::: ..|..||..||:|    .|......| :|.        |.:.|
 Frog   274 DQTETRTSYPNIFRIFNLVLY-ILLIIHWNGCIYYAFSKAIGFGADSWVYPN--------LTDPK 329

  Fly   444 NASVAILTTAETYSTALYFTFTSLTSVGFGNVSANTTAEKVFTIIMMLIGALMHAVVFGNVTAII 508
            :..:     |..|...||::..:||::| ......|..|.:|.|...|:|.|:.|.:.|||.::|
 Frog   330 HGYL-----AREYVYCLYWSTLTLTTIG-DTPQPMTDTEYLFVIFDFLVGVLIFATIVGNVGSMI 388

  Fly   509 QRMYSRRSLYESKWRDLKDFVALHNMPKELKQRIEDYFQTSWSLSHGIDIYETLREFPEELRGDV 573
            ..|.:.|:.::||...:|.::....:.|:|:.::..:|...|:....:|..|.|:..|::||.::
 Frog   389 SNMNATRTEFQSKIDAIKHYMQFRRVSKDLEAKVILWFDYLWTNKKTVDEREVLKNLPDKLRAEI 453

  Fly   574 SMHLHREIL-QLPIFEAASQGCLKLLSLHIKTNFCAPGEYLIHKGDALNYIYYLCNGSMEVIKDD 637
            ::::|.:.| ::.||:....|.|..|.|.::....:||:|:..|||....:|.:..|.:.|:.:|
 Frog   454 AINVHLDTLKKVRIFQNCEAGLLVELVLKLRPQVFSPGDYICRKGDIGREMYIIKEGKLAVVGED 518

  Fly   638 MVV--AILGKGDLVGSDINVHLVATSNGQMTATTNSAGQDVVVRSSSDIKALTYCDLKCIHMGGL 700
            .:.  |:|..|...| :|::             .|..|..:..|.::.|:::.|.||.|:....|
 Frog   519 GITHYAVLTSGSCFG-EISI-------------LNIEGSKMGNRRTASIRSIGYSDLFCLSKDDL 569

  Fly   701 VEVLRLYPEYQQQFANDIQHDLTCNLREGYENQDSDIGPSFPLPSISEDDENREEAEEGGKGEKE 765
            :|.|..||:.::......:..|   ::||..                  ||.:|:....||..:|
 Frog   570 MEALVEYPDAKKILEERGREIL---IKEGLL------------------DETKEKISVKGKSSEE 613

  Fly   766 NGGGPPSGASPLHNISNS--PLHATRSPLLGMGSPRNQRLHQRGRSLITLRETNKR 819
            .          |..:.::  .||...:.||...|...|.|.||    :||.|...|
 Frog   614 R----------LELVESNLDILHTRFARLLREYSNAQQTLKQR----VTLLELKLR 655

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ElkNP_477009.1 PAS_9 40..133 CDD:463873
PLN03192 270..>650 CDD:215625 106/402 (26%)
cNMP 586..716 CDD:197516 34/131 (26%)
cnga2XP_004916824.1 Ion_trans 153..395 CDD:459842 71/265 (27%)
CAP_ED 467..583 CDD:237999 34/129 (26%)
CLZ 583..651 CDD:465160 21/102 (21%)
Blue background indicates that the domain is not in the aligned region.

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