DRSC/TRiP Functional Genomics Resources

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Protein Alignment Elk and LOC100492237

DIOPT Version :10

Sequence 1:NP_477009.1 Gene:Elk / 37047 FlyBaseID:FBgn0011589 Length:1284 Species:Drosophila melanogaster
Sequence 2:XP_017953081.2 Gene:LOC100492237 / 100492237 XenbaseID:XB-GENE-29081083 Length:1114 Species:Xenopus tropicalis


Alignment Length:1226 Identity:507/1226 - (41%)
Similarity:674/1226 - (54%) Gaps:221/1226 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MPARKGLLAPQNTFLDTIATRFDGTHSNFVLGNAQA-NGNPIVYCSDGFVDLTGYSRAQIMQKGC 64
            ||..|||||||||||||||||||||||||||||||. |..|||||||||.||||::||::|||.|
 Frog     1 MPVMKGLLAPQNTFLDTIATRFDGTHSNFVLGNAQVLNLFPIVYCSDGFCDLTGFARAEVMQKSC 65

  Fly    65 SCHFLYGPDTKEEHKQQIEKSLSNKMELKLEVIFYKKEGAPFWCLFDIVPIKNEKRDVVLFLASH 129
            :|.|||||:|.|..|.||:|:|..|.|.|.|:|.|:|.|..||||.|||||||||.:||||||||
 Frog    66 ACKFLYGPETSELLKVQIQKALDEKREFKTEIILYRKSGGSFWCLLDIVPIKNEKGEVVLFLASH 130

  Fly   130 KDITHTKMLEMNVNEECDSVFALTAALLGARFRAGSNAGMLGLGGLPGLGGPAASDGDTEAGEGN 194
            |||:.||          :..|:                                  |:.:..|..
 Frog   131 KDISDTK----------NDYFS----------------------------------GEDKHTEDE 151

  Fly   195 NLDV-----PAGCNMGRRRSRAVLYQLSGHYKPEKGGVKTKLKLGNNFMHSTEAP-FPEYKTQSI 253
            :|::     |.|.|..|||||||||.||||.:.:.   |:||||.||..  .|.| .||||..:|
 Frog   152 DLEIYTDTRPPGFNTNRRRSRAVLYHLSGHLQKQD---KSKLKLNNNVF--GEKPNIPEYKVAAI 211

  Fly   254 KKSRLILPHYGVFKGIWDWVILVATFYVALMVPYNAAFAKADRQT-------KVSDVIVEALFIV 311
            :|||.||.|||.||..|||:||:||||||:.||||..|......|       .|||:.||.||::
 Frog   212 QKSRFILLHYGTFKAGWDWLILLATFYVAVTVPYNVCFTIPRDDTSSTRSPPSVSDIFVEILFML 276

  Fly   312 DILLNFRTTFVSRKGEVVSNSKQIAINYLRGWFALDLLAALPFDHLYA--SDLYDGEDSHIHLVK 374
            |||||||||:||:.|:||.:.:.|.::|...||.:||:||||||.|||  .::|.|    :||:|
 Frog   277 DILLNFRTTYVSKSGQVVYDPRSICVHYATTWFFVDLIAALPFDLLYAFSVNVYFG----VHLLK 337

  Fly   375 LTRLLRLARLLQKIDRYSQHTAMILTLLMFSFTLAAHWLACIWYVIAVKEYEWFPESNIGWLQLL 439
            ..|||||.|||||:|||||::|::|||||..|.|.|||:|||||.|..||.|   .:.||||...
 Frog   338 TVRLLRLLRLLQKLDRYSQYSAVVLTLLMSMFGLLAHWMACIWYFIGQKEIE---VNEIGWLHEF 399

  Fly   440 AERKNASVA----ILTT-------------------------AETYSTALYFTFTSLTSVGFGNV 475
            ::|......    |::|                         ..:|.|:|||..:||||||||||
 Frog   400 SKRLGLPYTPVEKIISTNSNIHSNGSHGGNQTLFDLIGGPSLRSSYITSLYFALSSLTSVGFGNV 464

  Fly   476 SANTTAEKVFTIIMMLIGALMHAVVFGNVTAIIQRMYSRRSLYESKWRDLKDFVALHNMPKELKQ 540
            ||||.|||:|:|..|:|||||||||||||||||||||||||||.::.:|||||:.:|.|||:|||
 Frog   465 SANTDAEKIFSICTMMIGALMHAVVFGNVTAIIQRMYSRRSLYHTRTKDLKDFIRVHRMPKQLKQ 529

  Fly   541 RIEDYFQTSWSLSHGIDIYETLREFPEELRGDVSMHLHREILQLPIFEAASQGCLKLLSLHIKTN 605
            |:.:.|||:||:::|||..|.||:||:|||.|::|||::|||||||||:||:|||:.|||.|||:
 Frog   530 RMLECFQTTWSVNNGIDANELLRDFPDELRADIAMHLNKEILQLPIFESASRGCLRSLSLSIKTS 594

  Fly   606 FCAPGEYLIHKGDALNYIYYLCNGSMEVIKDDMVVAILGKGDLVGSDINVHLVATSNGQMTATTN 670
            |||||||||.:||||..||::|:|||||::|:.|:||||||||:|||                  
 Frog   595 FCAPGEYLIRQGDALQAIYFVCSGSMEVLRDNTVLAILGKGDLIGSD------------------ 641

  Fly   671 SAGQDVVVRSSSDIKALTYCDLKCIHMGGLVEVLRLYPEYQQQFANDIQHDLTCNLREGYE---N 732
            :..:..|:::::::|:||||||:.|.:.||.|||.|||||.|:|.::||||||.|||||.|   :
 Frog   642 NLNKYQVIKTNANVKSLTYCDLQYISLKGLREVLELYPEYSQKFISEIQHDLTYNLREGSEADLD 706

  Fly   733 QDSDIGPSFPLPSISEDDENREEAEEGGKGEKENGGGPPSGASPLHNISNSPLHATRSP------ 791
            .:|:.|....||||.|||| .||.|.........|..|...:..|....:||:.:..:|      
 Frog   707 HESNGGVIQKLPSILEDDE-FEEDERSPLPVNSRGVSPVESSLKLPKAFSSPMLSPLTPRAFKTP 770

  Fly   792 ----------LLGMGSPRNQ----------RLHQRGRSLITLRETNKRH-RTLNAACS------L 829
                      ||| ||.|::          :|.....|:......:.|. ..:...||      .
 Frog   771 TKRADKSFGDLLG-GSERSKFSPGDGSRPCKLQLPALSISAPPMLSPRFVDGIETDCSSPTTQTF 834

  Fly   830 DRGSFEEPEPLEEEQSSGGKRPSLE----RLDSQVSTLHQDVAQLSAEVRNAISALQEMTFTSNA 890
            |....:|..|   ...|.|:.|..:    :|:.:::.|.|.|.|||.::...:..|:.:......
 Frog   835 DFKLGQENSP---RHCSSGENPETQKDIVKLNQEMTVLTQQVTQLSKDLNEMMQLLRPVLLNQAY 896

  Fly   891 MTSHSSLKFPPARSIPNISGVAGTRSGVAVEHGLMGGVLAAAELAAMQRSSSHPPEVWGRDVQLP 955
            ..|.|:....|  .:...|..:|..||    |...|.:.:.|       .|:.|.|.  |....|
 Frog   897 APSPSTGVLTP--GLNTYSNSSGYCSG----HQSQGTIPSLA-------GSACPGET--RADIAP 946

  Fly   956 TSNTASSKAPSP---VEPKKTMTSRSSQTDFYRIDFPTFERFVLANPRLVLGLLGIEPAIKNEMD 1017
            ::.|.....|.|   |:|:.:    ..|.....:...:|.|....:||                 
 Frog   947 SNTTWMDPFPQPSQTVQPENS----EKQNVHPALSLDSFLRHSCHHPR----------------- 990

  Fly  1018 LLQQKQTLQISPLN-TIDECVSPSDHNLASSKERLITSSAVPTPGRIYPPLD--DENSNDFRWTM 1079
               |.::.....|| |:..|:|.......:...:::.|::.|......|..:  |.....:.:| 
 Frog   991 ---QHRSCGPQSLNQTLSPCISHCTPKQINHVSQVVHSNSSPVMASHSPSTEQYDAQKTSYGFT- 1051

  Fly  1080 KHSASHHSCCKSTDALLSPEEQPPISILPVDATPAPSVQEVRSSKRSLRKSTSGSN 1135
                :...||       .|::..||.....|.....|...|.:|..:..:...||:
 Frog  1052 ----TTKPCC-------GPQDSDPIRERVADLLGLMSRDYVETSSPAALELVCGSS 1096

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ElkNP_477009.1 PAS_9 40..133 CDD:463873 63/92 (68%)
PLN03192 270..>650 CDD:215625 236/417 (57%)
cNMP 586..716 CDD:197516 69/129 (53%)
LOC100492237XP_017953081.2 PRK13557 41..>134 CDD:237425 63/92 (68%)
PLN03192 179..>639 CDD:215625 263/471 (56%)
PRK11753 602..>680 CDD:236969 43/95 (45%)

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