DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Elk and kcnh4

DIOPT Version :9

Sequence 1:NP_477009.1 Gene:Elk / 37047 FlyBaseID:FBgn0011589 Length:1284 Species:Drosophila melanogaster
Sequence 2:XP_002942364.2 Gene:kcnh4 / 100488431 XenbaseID:XB-GENE-1014062 Length:1074 Species:Xenopus tropicalis


Alignment Length:1321 Identity:486/1321 - (36%)
Similarity:650/1321 - (49%) Gaps:395/1321 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MPARKGLLAPQNTFLDTIATRFDGTHSNFVLGNAQA-NGNPIVYCSDGFVDLTGYSRAQIMQKGC 64
            ||..|||||||||||||||||||||||||:|.|||. :|.|||||||||.||||:.|.::|||.|
 Frog     1 MPVMKGLLAPQNTFLDTIATRFDGTHSNFLLANAQVHHGFPIVYCSDGFCDLTGFGRTEVMQKNC 65

  Fly    65 SCHFLYGPDTKEEHKQQIEKSLSNKMELKLEVIFYKKEGAPFWCLFDIVPIKNEKRDVVLFLASH 129
            :|.||||.:|.|...|.||:.|..|.|.:.||..|||:...|||..|||||||||.:|||||.|.
 Frog    66 TCRFLYGVETSENVIQDIERVLDEKQEYQAEVCLYKKDANLFWCQLDIVPIKNEKGEVVLFLFSF 130

  Fly   130 KDITHTKML--------EMNVNEECDSVFALTAALLGARFRAGSNAGMLGLGGLPGLGGPAASDG 186
            ||.|..:|.        |.:.|....|          :.||:                       
 Frog   131 KDTTEIRMRMQYSDKKEEKHKNRRSGS----------SHFRS----------------------- 162

  Fly   187 DTEAGEGNNLDVPAGCNMGRRRSRAVLYQLSGHYKPEKGGVKTKLKLGNNFMHSTEAPFPEYKTQ 251
                              .||:||.::.|:||..   .|..|:.|||.:|.: ..:...||||..
 Frog   163 ------------------SRRQSRTMMCQMSGQV---AGRNKSDLKLNSNLL-DNKPSLPEYKVA 205

  Fly   252 SIKKSRLILPHYGVFKGIWDWVILVATFYVALMVPYNAAF------AKADRQTKVSDVIVEALFI 310
            |.:|.|.||.||.:||.:|||:||:||||||:.||||..|      ..|.|.|.|||:.||.|||
 Frog   206 SAEKPRFILLHYSIFKALWDWLILLATFYVAVTVPYNVCFTGHDDSVSAARSTIVSDIAVEMLFI 270

  Fly   311 VDILLNFRTTFVSRKGEVVSNSKQIAINYLRGWFALDLLAALPFDHLYASDLYDGEDSHIHLVKL 375
            :||:||||||:||..|:||..::.|.|:||..||.:||:||||||.|||.::  ...|.:||:|.
 Frog   271 IDIILNFRTTYVSHSGQVVYETRSICIHYLATWFFVDLIAALPFDLLYAFNV--TVTSLVHLLKT 333

  Fly   376 TRLLRLARLLQKIDRYSQHTAMILTLLMFSFTLAAHWLACIWYVIAVKEYE------WFPESNIG 434
            .|||||.|||||:|||||::||:|||||..|.|.|||:||:||||..||.|      |    :||
 Frog   334 IRLLRLLRLLQKLDRYSQYSAMVLTLLMSMFALLAHWMACVWYVIGRKEMESNDPVTW----DIG 394

  Fly   435 WLQLLAERK-----NASVAILTTAETYSTALYFTFTSLTSVGFGNVSANTTAEKVFTIIMMLIGA 494
            ||..|.:|.     |.|:...:....|..:||||.:||||||||||.|||.|||:|:|..|||||
 Frog   395 WLHELGKRLEAPYINNSIGGPSIRSAYIASLYFTLSSLTSVGFGNVCANTDAEKIFSICTMLIGA 459

  Fly   495 LMHAVVFGNVTAIIQRMYSRRSLYESKWRDLKDFVALHNMPKELKQRIEDYFQTSWSLSHGIDIY 559
            ||||||||||||||||||||||||.::.:|||||:.:|.:|::||||..:||||:||:::|||..
 Frog   460 LMHAVVFGNVTAIIQRMYSRRSLYHTRVKDLKDFIRVHCLPQQLKQRTLEYFQTTWSVNNGIDAN 524

  Fly   560 ETLREFPEELRGDVSMHLHREILQLPIFEAASQGCLKLLSLHIKTNFCAPGEYLIHKGDALNYIY 624
            |.|::||:|||.|::|||:::||||.:||.||:|||:.|||||||:||||||||:.:||||...|
 Frog   525 ELLKDFPDELRADIAMHLNKDILQLSVFETASRGCLRALSLHIKTSFCAPGEYLLRQGDALQANY 589

  Fly   625 YLCNGSMEVIKDDMVVAILGKGDLVGSDINVHLVATSNGQMTATTNSAGQDVVVRSSSDIKALTY 689
            ::|:||:||:||:||:||||||||:|:|:                  :.:|.|:::::|:|||||
 Frog   590 FVCSGSLEVLKDNMVLAILGKGDLIGADL------------------SNKDQVIKTNADVKALTY 636

  Fly   690 CDLKCIHMGGLVEVLRLYPEYQQQFANDIQHDLTCNLREGYENQ----------------DSDIG 738
            |||:.:.:.||:|||.|||||..:|..||.||||.|||||.|..                :|...
 Frog   637 CDLQYLSLRGLLEVLELYPEYCNKFRADIHHDLTFNLREGSETNGCYRFSRSPRLSQPRPESGAT 701

  Fly   739 PSFPLPSISEDDENREEAEEGGKGEKENGGGPPSGASPLHNISNSPLHATRSPLL--GMGSP--- 798
            |...|.||.||::..::                       ...:||...||..|:  .:.||   
 Frog   702 PEKKLASILEDNDETDD-----------------------YFRHSPASMTRRKLMLPNLNSPIRR 743

  Fly   799 ------------------RNQRL-----HQRG-----RSLITLRETNKRHRTLN---------AA 826
                              ||.|.     |.|.     |....:.:|...|:..|         |.
 Frog   744 GSLSSLLGDELRQFHAFRRNCRSPGRTNHGRSPSPQCRKAERVIDTEGSHKPANLLIPALNTYAP 808

  Fly   827 CSL---------DRGSFEEPE-------------PLEEEQSSGGK-------------RPSLERL 856
            .:|         |.|...|.:             |..:...:|.|             :.::.||
 Frog   809 PNLSPRVVDGIEDSGDISESQTFQFNVDNSRARSPTRQSPPAGVKVMNPILAAEAEEIKQNICRL 873

  Fly   857 DSQVSTLHQDVAQLSAEVRNAISALQEM----------------TFTSNAMTSHSSLKFPPARSI 905
            :.:::.|:|:|:|||.|:::.:..||.:                ...|...::|.|.....|||.
 Frog   874 NLEINNLNQEVSQLSKELQHMMRLLQTLLAAQQYNATIGCPYTVQVVSTPPSAHLSCNEQQARSN 938

  Fly   906 PNISGVAGTRSGVAVEHGLMGGVLAAAELAAMQRSSSHPPEVWGRDVQLPTSNTASSKAPSPVEP 970
            .|                                 :.||..:    ||.|........||.|   
 Frog   939 YN---------------------------------APHPVHI----VQEPPMQRTVGHAPFP--- 963

  Fly   971 KKTMTSRSSQTDFYRIDFPTFERFVLANPRLVLGLLGIEPAIKNEMDLLQQKQTLQISPLNTIDE 1035
                    |...:.::.|..                                             
 Frog   964 --------SDIGYAQVHFAR--------------------------------------------- 975

  Fly  1036 CVSPSDHNLASSKERLITSSAVPTPGRIYPPLDDENSNDFRWTMKHSASHHSCCKSTDALLSPEE 1100
             |||...|..:|::    ...:||                          ::.| :|...||.||
 Frog   976 -VSPDAENFHASRD----WGYIPT--------------------------NTLC-TTGTPLSHEE 1008

  Fly  1101 QPPISIL--PVDATPAPSVQEVRSSKRSLRKSTSGSNSSLSSSSSSSNSCLVSQSTGNLTTTN-A 1162
            .....:|  |.:|||   ||:...|      .|||                 ....|:|:.|: :
 Frog  1009 MERARLLQHPEEATP---VQQTYGS------PTSG-----------------PPVIGHLSMTSMS 1047

  Fly  1163 SVH----CSNSSQSVASVATT 1179
            |||    |.|.:.|..:::::
 Frog  1048 SVHSFSDCPNENSSPQTISSS 1068

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ElkNP_477009.1 PAS 36..132 CDD:238075 56/96 (58%)
PAS_3 41..129 CDD:285623 52/87 (60%)
Ion_trans 285..516 CDD:278921 143/247 (58%)
Ion_trans_2 <455..510 CDD:285168 42/54 (78%)
Crp 583..>650 CDD:223736 46/66 (70%)
CAP_ED 586..715 CDD:237999 67/128 (52%)
kcnh4XP_002942364.2 PAS_9 36..135 CDD:290162 57/98 (58%)
PAS 42..132 CDD:238075 53/89 (60%)
Ion_trans 262..481 CDD:278921 133/224 (59%)
Ion_trans_2 <421..475 CDD:285168 42/53 (79%)
CAP_ED 551..661 CDD:237999 67/127 (53%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 287 1.000 Domainoid score I1557
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 775 1.000 Inparanoid score I526
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D247304at2759
OrthoFinder 1 1.000 - - FOG0000148
OrthoInspector 1 1.000 - - otm47501
Panther 1 1.100 - - O PTHR10217
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X71
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
99.070

Return to query results.
Submit another query.