DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Elk and kcnh7

DIOPT Version :9

Sequence 1:NP_477009.1 Gene:Elk / 37047 FlyBaseID:FBgn0011589 Length:1284 Species:Drosophila melanogaster
Sequence 2:XP_031749023.1 Gene:kcnh7 / 100486080 XenbaseID:XB-GENE-853944 Length:1205 Species:Xenopus tropicalis


Alignment Length:1237 Identity:370/1237 - (29%)
Similarity:562/1237 - (45%) Gaps:326/1237 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MPARKGLLAPQNTFLDTIATRFDGTHSNFVLGNAQANGNPIVYCSDGFVDLTGYSRAQIMQKGCS 65
            ||.|:|.:|||||||.||..:|:|.:..|::.||:.....|:||:|||.::||:||..:|||.|:
 Frog     1 MPVRRGHVAPQNTFLGTIIRKFEGQNKKFIIANARVQNCAIIYCNDGFCEMTGFSRPDVMQKPCT 65

  Fly    66 CHFLYGPDTKEEHKQQIEKSLSNKMELKLEVIFYKKEGAPFWCLFDIVPIKNEKRDVVLFLASHK 130
            |.||:||:||.....||.::|....|.|:.|.:|.|:|:.|.|...|:|:||::...::|:.:.:
 Frog    66 CDFLHGPETKRHDIAQIAQALLGSEERKVVVTYYHKDGSTFLCSTHIIPVKNQEGVAMMFIMNFE 130

  Fly   131 DIT------------------------------------HTKM---------LEMNVNEECDSVF 150
            .:|                                    |.|.         :.::.::..|...
 Frog   131 YVTKIESPVSPERIPRLLPITPENRKLFGIQFPQLRLLSHRKQSLPQEDPDAVIVDSSKHSDDSM 195

  Fly   151 AL------------------TAALLGA----------------------------RFRAGSN--- 166
            |:                  |.||:.:                            |..|||:   
 Frog   196 AMKHFKSPTKESCSPSEADDTKALIDSHKCSTLVNVTGPLDHSSPKRQWDQLFPDRLHAGSHISH 260

  Fly   167 -------AGMLGLGGLPGLGG----PAASDGDTEAGEGNNLDV---------------------- 198
                   ..|.....:..:.|    |.:...|..|.|.|..|.                      
 Frog   261 ARSKDSVCSMRRASSVHDIEGFSIHPKSVFRDRHASEDNGRDFKVSHSWMTGGPFNHIKSSLLGS 325

  Fly   199 PAGCNMGRRRSRAVLYQLSGHYKPEKGGVKTK----------------------------LKLGN 235
            .:..|:.:..:...:.||:.::...|...|..                            |.||.
 Frog   326 TSDSNLNKYSTINKIPQLTLNFSDVKNEKKASSPPSSEKTIIAPKVKERTHNVTEKVTQVLSLGA 390

  Fly   236 NFMHSTEAPFPEYKTQSIKKSRLILPHYGVFKGIWDWVILVATFYVALMVPYNAAFAKADRQTK- 299
            :.:       ||||.|:.:.::..:.||..||.:|||:||:...|.|:..||:|||...||:.: 
 Frog   391 DVL-------PEYKLQTPRINKFTILHYSPFKAVWDWLILLLVIYTAIFTPYSAAFLLNDREEQK 448

  Fly   300 ------------VSDVIVEALFIVDILLNFRTTFVSRKGEVVSNSKQIAINYLRGWFALDLLAAL 352
                        |.|::|:.:||:|||:|||||:|::..||||:..:|||:|.:|||.:|::||:
 Frog   449 RRECGYSCNPLNVVDLMVDIMFIIDILINFRTTYVNQNEEVVSDPAKIAIHYFKGWFLIDMVAAI 513

  Fly   353 PFDHLYASDLYDGEDSHIHLVKLTRLLRLARLLQKIDRYSQHTAMILTLLMFSFTLAAHWLACIW 417
            |||.|......|...:.|.|:|..|||||.|:.:|:||||::.|.:|.|||..|.|.||||||||
 Frog   514 PFDLLIFGSGSDETTTLIGLLKTARLLRLVRVARKLDRYSEYGAAVLMLLMCIFALIAHWLACIW 578

  Fly   418 YVIAVKEYEWFPESNIGWLQLLAER---------KNASVAILTTAETYSTALYFTFTSLTSVGFG 473
            |.|...|..:... .|.||..|.::         .::..:|   .:.|.|||||||:||||||||
 Frog   579 YAIGNVERPYLIH-KISWLDALGDQIKKPYNYSDPSSGPSI---KDKYVTALYFTFSSLTSVGFG 639

  Fly   474 NVSANTTAEKVFTIIMMLIGALMHAVVFGNVTAIIQRMYSRRSLYESKWRDLKDFVALHNMPKEL 538
            |||.||.:||||:|.:||||:||:|.:||||:|||||:||..:.|..:...:|:|:..|.:|..|
 Frog   640 NVSPNTNSEKVFSICVMLIGSLMYASIFGNVSAIIQRLYSGTARYHMQMLRVKEFIRFHQIPNPL 704

  Fly   539 KQRIEDYFQTSWSLSHGIDIYETLREFPEELRGDVSMHLHREILQ-LPIFEAASQGCLKLLSLHI 602
            :||:|:|||.:||.::|||:...|:.|||.|:.|:.:||::.:|| ...|..||:|||:.|::..
 Frog   705 RQRLEEYFQHAWSYTNGIDMNMVLKGFPECLQADICLHLNKTLLQNCKAFSGASKGCLRALAMKF 769

  Fly   603 KTNFCAPGEYLIHKGDALNYIYYLCNGSMEVIKDDMVVAILGKGDLVGSDINVHLVATSNGQMTA 667
            ||....||:.|:|.||.|..:|:|..||:|::|||:|||||||.|:.|.  .|||.|...     
 Frog   770 KTTHAPPGDTLVHSGDILTALYFLSRGSIEILKDDIVVAILGKNDIFGE--MVHLYAKPG----- 827

  Fly   668 TTNSAGQDVVVRSSSDIKALTYCDLKCIHMGGLVEVLRLYPEYQQQFANDIQHDLTCNLREGYEN 732
                       :|.:|::|||||||..|....|:|||.:|||:..||..::  :||.|||:  ||
 Frog   828 -----------KSIADVRALTYCDLHKIQREDLLEVLDMYPEFSDQFLTNL--ELTFNLRD--EN 877

  Fly   733 Q---------DSDI-GPSFPL-------PSISEDDENREEAEEGGKGE----------KENGGGP 770
            .         |.|. |.:..|       .:.|::|.:|:|::.|.:..          |:|....
 Frog   878 SKAALLRSHADIDFNGENCKLRRRKLSFKNKSDEDCSRDESQNGSESSTDDTRNYSSTKKNMDIK 942

  Fly   771 PSGASPLHNISNSPLHATRSPLLGMGS-PRNQRLHQR-------------------------GRS 809
            .||:|........||:...|....:.| |..|:..:.                         .|.
 Frog   943 KSGSSSSSINETKPLYTEISAYTSVFSKPSGQQFEEAVCPSAKLNLGKRSASNKDITGTRSWERE 1007

  Fly   810 LITLRETNKRHRTLN----AACSLDR----GSFEEPEPLEEEQSSGGKRPSLERLDSQVSTLHQD 866
            ...|.::...|..||    ..|..|.    |..|:...|.:||        :.||:.|:::..|.
 Frog  1008 NAVLHDSAPNHSALNHTTWGICEADNDLTYGEMEKRLDLIQEQ--------MNRLELQMTSDIQA 1064

  Fly   867 VAQLSAEVRNAISALQEMTFTS-----------NAMTSHSSLK----FPPARSIPNISGVAGTR- 915
            :.||.....:.|.....|...|           .:|.:.:|:|    |.|:...|.::.:..:| 
 Frog  1065 ILQLLQRQSSLIPPAYSMVTASCEYARPTARRVQSMHAKASIKTDRSFSPSSQSPELAELEKSRP 1129

  Fly   916 -------SGV------------AVEHGLMGGVLAAAELAAMQRSSSHPPEVWG--RDVQLPTSNT 959
                   ||.            .|:||         :...::....|.|....  |...||.|:.
 Frog  1130 KSKESLSSGAHLNPTPEDNPAQGVDHG---------QEHPLESQPRHCPSYLNPIRHTSLPDSSV 1185

  Fly   960 AS 961
            .|
 Frog  1186 NS 1187

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ElkNP_477009.1 PAS 36..132 CDD:238075 37/95 (39%)
PAS_3 41..129 CDD:285623 37/87 (43%)
Ion_trans 285..516 CDD:278921 121/252 (48%)
Ion_trans_2 <455..510 CDD:285168 40/54 (74%)
Crp 583..>650 CDD:223736 33/67 (49%)
CAP_ED 586..715 CDD:237999 55/128 (43%)
kcnh7XP_031749023.1 PAS_9 29..134 CDD:404329 40/104 (38%)
Ion_trans 417..679 CDD:395416 126/265 (48%)
CAP_ED 753..864 CDD:237999 55/128 (43%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D247304at2759
OrthoFinder 1 1.000 - - FOG0000148
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X71
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
43.920

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