DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Elk and kcnh5

DIOPT Version :10

Sequence 1:NP_477009.1 Gene:Elk / 37047 FlyBaseID:FBgn0011589 Length:1284 Species:Drosophila melanogaster
Sequence 2:XP_012823505.2 Gene:kcnh5 / 100151738 XenbaseID:XB-GENE-1013572 Length:1000 Species:Xenopus tropicalis


Alignment Length:1016 Identity:325/1016 - (31%)
Similarity:510/1016 - (50%) Gaps:170/1016 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MP-ARKGLLAPQNTFLDTIATRFDGTHSNFVLGNAQANGNPIVYCSDGFVDLTGYSRAQIMQKGC 64
            || .::||:|||||||:.|..|  .:.|:|:|||||....|:||.:|||..|:||.||.||||..
 Frog     4 MPGGKRGLVAPQNTFLENIVRR--SSESSFLLGNAQIVDWPVVYSNDGFCKLSGYHRADIMQKSS 66

  Fly    65 SCHFLYGPDTKEEHKQQIEKSLSNKMELKLEVIFYKKEGAPFWCLFDIVPIKNEKRDVVLFLASH 129
            :|.|:||..|.::..:::.::..|......||:.|||...|.|....|.||:||...|||||.:.
 Frog    67 TCSFMYGELTDKKTIEKVRQTFENYESNCFEVLLYKKSRTPVWFYMQIAPIRNEHEKVVLFLCTF 131

  Fly   130 KDITHTKMLEMNVNEECDSVFALTAALLGARFRAGSNAGMLGLGGLPGLGGPAASDGDTEAGEGN 194
            ||||   :.:..:.:|.      |.|.||.                |.|..|            .
 Frog   132 KDIT---LFKQPIEDES------TRATLGP----------------PPLNNP------------Q 159

  Fly   195 NLDVPAGCNMGRRRSRAVLYQLSGHYKPE----KGGVKTKLKLGNNFMHSTEAPFPEYKTQSIKK 255
            .....|........||:||.||:...|.|    ...:...|:||::.:       |:||.::.|.
 Frog   160 RWTKFARLTRALTNSRSVLQQLTPMNKAEVVHKHSRLAEVLQLGSDIL-------PQYKQEAPKT 217

  Fly   256 SRLILPHYGVFKGIWDWVILVATFYVALMVPYNAAFAKADRQTK-------VSDVIVEALFIVDI 313
            ...|:.||..||..||||||:.|||.|:|||||.:|     :||       |.|.:|:.:|:|||
 Frog   218 PPHIILHYCAFKTTWDWVILILTFYTAIMVPYNVSF-----KTKQNNIAWLVLDSVVDVIFLVDI 277

  Fly   314 LLNFRTTFVSRKGEVVSNSKQIAINYLRGWFALDLLAALPFDHLYASDLYD-GEDSHIHLVKLTR 377
            :|||.||||...|||:|:.|.|.:|||:.||.:|||:.||:|.:.|.:..| |..|....:|:.|
 Frog   278 VLNFHTTFVGPGGEVISDPKLIRMNYLKTWFVIDLLSCLPYDIINAFENVDEGMSSLFSSLKVVR 342

  Fly   378 LLRLARLLQKIDRYSQHTAMILTLLMFSFTLAAHWLACIWYVIAVKEYEWFPE-----SNIGWLQ 437
            ||||.|:.:|:|.|.::.|.:|.||:..|.|.|||||||||  ::.:||...|     ....||.
 Frog   343 LLRLGRVARKLDHYLEYGAAVLVLLVCVFGLVAHWLACIWY--SIGDYEVIDEVTNTIKKDSWLY 405

  Fly   438 LLA------ERKNASVAIL-----TTAETYSTALYFTFTSLTSVGFGNVSANTTAEKVFTIIMML 491
            .|.      .|.|||.:..     :....|.::||||.||||::||||::..|..||:|::.||:
 Frog   406 QLGLSIGTPYRYNASGSGQWEGGPSKDSLYVSSLYFTMTSLTTIGFGNIAPTTDGEKIFSVAMMM 470

  Fly   492 IGALMHAVVFGNVTAIIQRMYSRRSLYESKWRDLKDFVALHNMPKELKQRIEDYFQTSWSLSHGI 556
            :|:|::|.:|||||.|.|:||:..:.|.....:::||:.|:.:||.|.:|:.||..::||:|.||
 Frog   471 VGSLLYATIFGNVTTIFQQMYANTNRYHEVLNNVRDFLKLYQVPKGLSERVMDYIVSTWSMSKGI 535

  Fly   557 DIYETLREFPEELRGDVSMHLHREIL-QLPIFEAASQGCLKLLSLHIKTNFCAPGEYLIHKGDAL 620
            |..:.|...|:::|.|:.:||:|::. :.|.|..||.|||:.|::..:|..||||:.:.|.|:::
 Frog   536 DTEKVLGICPKDMRADICVHLNRKVFNEHPAFRLASDGCLRSLAVEFQTIHCAPGDLIYHAGESV 600

  Fly   621 NYIYYLCNGSMEVIKDDMVVAILGKGDLVGSDINVHLVATSNGQMTATTNSAGQDVVVRSSSDIK 685
            :.:.::.:||:|||:|:.|||||||||:.|   :|....|:               :..:.::::
 Frog   601 DALCFVVSGSLEVIQDEEVVAILGKGDVFG---DVFWKETT---------------LAHACANVR 647

  Fly   686 ALTYCDLKCIHMGGLVEVLRLYPEYQQQFANDIQHDLTCNLR---------------EGYENQDS 735
            |||||||..|....|::||..|..:...|:.::  .||||||               |..:.|.:
 Frog   648 ALTYCDLHIIKREALLKVLDFYTAFANSFSRNL--TLTCNLRKRIVFRKISDVKKEEEERQRQKN 710

  Fly   736 DIGPSFPL--------PSISEDDENREEAEEGGKGEKE---------NGGGPPSGASPLHNISNS 783
            ::..|.|:        ....:..|.|.:.......|:.         :.|...:|.|.:.....:
 Frog   711 EVTLSIPVDHPVRKLFQKFKQQKELRNQGSTNSDLERNQLQVEHRSMHNGAVLTGTSVVTVSQIT 775

  Fly   784 PLHATRSPLLGMGSPRNQRLHQRGRSLITLRETNKRHRTLNAACSLDRGSFEEPEPLEEEQSSGG 848
            |:..:.|.:               |:..:|::.|:....|..:.|.|..|.:...|:..:..:|.
 Frog   776 PIQTSLSYV---------------RTNESLKQNNRDAMELKPSSSSDTKSLKVTSPVRLKNGNGK 825

  Fly   849 KRPSLERLDSQVSTLHQDVAQLSAEVRNAISALQEMTFTSN---AMTSHSSLKFPPARSIPNI-S 909
            ....|:.        :..|.:...|..|.::..:.:...|:   .....|::...|.|...:. |
 Frog   826 GWLKLKN--------NMQVQEEKKEDWNNVTKAESLGLLSDDPKCTDPESNVSKNPLRKTDSCDS 882

  Fly   910 GVAGTRSGVAVEHGLMGGVLAAAELAAMQRSSSHP----PE 946
            |:  |:|.:.::..  |...:..|.:.:|..:.||    ||
 Frog   883 GI--TKSDLRLDKA--GETRSPLEHSPLQADAKHPFYPIPE 919

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ElkNP_477009.1 PAS_9 40..133 CDD:463873 40/92 (43%)
PLN03192 270..>650 CDD:215625 172/404 (43%)
cNMP 586..716 CDD:197516 45/129 (35%)
kcnh5XP_012823505.2 PAS_9 42..135 CDD:463873 40/92 (43%)
PLN03192 232..>632 CDD:215625 173/409 (42%)
Crp 567..>717 CDD:440428 54/169 (32%)

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