DRSC/TRiP Functional Genomics Resources

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Protein Alignment PPO1 and Lsp1gamma

DIOPT Version :9

Sequence 1:NP_476812.1 Gene:PPO1 / 37044 FlyBaseID:FBgn0283437 Length:690 Species:Drosophila melanogaster
Sequence 2:NP_523868.1 Gene:Lsp1gamma / 38015 FlyBaseID:FBgn0002564 Length:772 Species:Drosophila melanogaster


Alignment Length:738 Identity:180/738 - (24%)
Similarity:298/738 - (40%) Gaps:200/738 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly    77 KIGL---KNQF--SLFNNRHREIASELITLFMSAPNLRQFVSLSVYTKDRVNPVLFQYAYAVAVA 136
            |:|.   |.:|  :|....|:: |..|...|..|.:...||....:.:..||..:|.||..:||.
  Fly    83 KLGALLPKGEFFGALVKTHHKQ-AYGLFNFFYYAKDWETFVRNVAWARIHVNEGMFVYALTLAVI 146

  Fly   137 HRPDTREVPITNISQIFP-----SNFV---------------------------EPSAF------ 163
            |:|:...:.:..|.:|||     |.||                           :.|.|      
  Fly   147 HKPEFEG
LILPQIYEIFPQYFFNSKFVYAAEKFDYEVFSKLTMYEKEYKDILYKDYSEFTGNFYF 211

  Fly   164 --RDAR-----------QEASVIGESGAR----------VHVDI---------PQNYTASDRE-- 194
              :|.:           ||..|..:...|          .:||:         |.:||   |:  
  Fly   212 YTKDWKTWQWYKMMGLDQEWYVEDKYFLRENLSQFVNDPKYVDVVKGLKKFYMPVDYT---RDID 273

  Fly   195 ---DEQRLAYFREDIGVNSHHWHWHLVYP--TTGPTEVVNKDRRGELFYYMHHQILARYNVERFC 254
               ||.::.||.||:|.|::.::.::.|.  ..|....::||||||.:.|...||||||..||..
  Fly   274 FFNDETKMTYFTEDLGWNAYWYYLNMDYAFFLNGKQFGLDKDRRGEYWIYNVQQILARYYQERLA 338

  Fly   255 NNLKKVQPLNNLRVEVPE---------GYFPKILSSTNNRTYPARVTNQKLRDVDRHDGRVEI-S 309
            |...          |:||         ||.|::: ..|...|..|   :...|...: |:.|: |
  Fly   339 NGFG----------EIPEFFWYKQIEYGYDPQLI-YYNGIGYSYR---KNYYDFYTY-GKFEMYS 388

  Fly   310 DVERWRDRVLAAIDQGYVEDSSGNRIPLDEVRGIDILGNMIEASPVLSINY--NFYGNLHNEGHN 372
            .::.:..||...::.|:.:.:.|....|.:...|.|:||.::.:......|  |:|..|.:    
  Fly   389 QIQNFFSRVYKVLETGFYKTADGQVFDLHKPEAIKIVGNYLQGNADTFDKYFFNYYYLLAH---- 449

  Fly   373 IISFAHDPDYRHLEEF-GVMGDVTTAMRDPIFYRWHGFIDTVFNKFKTRLNPYNAGELNFDGITV 436
             :.|| |.||..:|.| .|..:..|.:|||.||.::.....||..||..|.||...:|.::|||:
  Fly   450 -MYFA-DVDYNDMEVFPNVFLNFETMLRDPFFYTFYKKFTDVF
YTFKYYLKPYTQKDLFYEGITI 512

  Fly   437 DYIEAKIGKSNTKANTLLTYWQKSSADLAAGLDFGPTT---------------DRNIFASFTHLQ 486
                     .:...:.|:||:     |:   :||..|.               |:.:.|....|.
  Fly   513 ---------KDVSVSKLVTYY-----DI---VDFDVTNLLNDKMTFVDGQYIWDKALLARQARLN 560

  Fly   487 NAPFTYTFNVTNNGARRTGTCRIFICPKVDERNQALNLEEQRLLAIEMDKFTVDLVPGENTIRRQ 551
            :.||.:.|.:.::..:: |..|:|:.||.||..:.:.|:..|...:::|.|....:.|.|||:|.
  Fly   561 HKPFNFEFTIDSDKVQK-GVVRVFLGPKFDEYGRVIPLDYNRKNFVQIDSFVYPFIAGTNTIKRS 624

  Fly   552 STESS---------------VAIPFERSFRPVGADY-----QPKAADELARFKFCGCGWPQHLLL 596
            |.|.|               |.:..|..:     |:     :|..|            :|..|:|
  Fly   625 SKEFSWTAEDRITYTELYKYVMLASEGKY-----DFPLDISEPHNA------------FPDRLVL 672

  Fly   597 PKGNAQGMVFDLFVMISDYSQDSVEQPKTPNDACSTAYSFCGLKDKLYPDRRTMGYPFDRRLPNA 661
            |||..|||....:..:|.:: ::.||....:...|:... .|.:   :.|.:..||||||::..:
  Fly   673 PKGWEQGMPMQFYFFVSPFA-ETYEQFSNFDYTYSSGVG-SGTR---FVDTKPFGYPFDRQIDES 732

  Fly   662 NLTELVGAFGNMAKTDLRIVFND 684
            :.....|.|     .|:::.:.|
  Fly   733 DFFVPNGFF-----KDVKVYYVD 750

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PPO1NP_476812.1 Hemocyanin_N 27..142 CDD:281684 21/69 (30%)
Hemocyanin_M 152..414 CDD:278784 85/351 (24%)
Hemocyanin_C 423..682 CDD:281685 67/293 (23%)
Lsp1gammaNP_523868.1 Hemocyanin_N 31..153 CDD:397678 21/70 (30%)
Hemocyanin_M 159..490 CDD:395296 86/354 (24%)
Hemocyanin_C 499..747 CDD:397679 67/292 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45470660
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR11511
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
32.940

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