DRSC/TRiP Functional Genomics Resources

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Protein Alignment PPO1 and Lsp1beta

DIOPT Version :9

Sequence 1:NP_476812.1 Gene:PPO1 / 37044 FlyBaseID:FBgn0283437 Length:690 Species:Drosophila melanogaster
Sequence 2:NP_001285556.1 Gene:Lsp1beta / 33274 FlyBaseID:FBgn0002563 Length:789 Species:Drosophila melanogaster


Alignment Length:670 Identity:164/670 - (24%)
Similarity:279/670 - (41%) Gaps:137/670 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    91 HREIASELITLFMSAPNLRQFVSLSVYTKDRVNPVLFQYAYAVAVAHRPDTREVPITNISQIFPS 155
            |.:.|..|...|..|.:...|.:...:.:..||..:|.||..:||.||.|...:.:.:|.:|||.
  Fly   102 HAKQARGLFNFFYYAKDWETFAANVAWARMHVNEGMFVYALTMAVIHRNDFHG
LMLPSIYEIFPQ 166

  Fly   156 NFVEPSAFRDARQ-------EASVIGESGARVH-----VDIPQNYTASD---------------- 192
            .|.......:|.:       :.::..:....|:     .|....|.:||                
  Fly   167 FFFNSKFVFEAEKFDYEMWMKMTMYEKEYMDVYYKTNGYDYSTMYRSSDYTYMKDFKTWQWWKLM 231

  Fly   193 --------------RED-----------------------------------EQRLAYFREDIGV 208
                          ||:                                   |.:|:||.||:|.
  Fly   232 GLGEHWYTEDKFILRENIYEFNQETKWLSMMKDVKKFYMPVDYTRDLNLYNKESKLSYFTEDLGW 296

  Fly   209 NSHHWHWHLVYP--TTGPTEVVNKDRRGELFYYMHHQILARYNVERFCNNLKKVQPLNNLRVEVP 271
            |::.::.::.|.  ..|.|..:..|||||.:.|..||:|:||.:||..:...:: |..:...::.
  Fly   297 NAYWYYLNMDYSFFLDGNTFDLKNDRRGEWWLYNVHQLLSRYYMERLSHGFGEI-PEFSWYQQIE 360

  Fly   272 EGYFPKILSSTNNRTYPARVTNQKLRDVDRHDGRVEISDVERWRDRVLAAIDQGYVEDSSGNRIP 336
            .||.|::: ..|...|..|....::.....:|   .:..:..:..|:...::.||.:.:.|:.|.
  Fly   361 MGYDPQLI-YYNGIGYSFRKNYYEMETYANYD---MLDKITGFLKRIHNIVEMGYYKTADGHTID 421

  Fly   337 LDEVRGIDILGNMIEASPVLSINYNFYGNLHNEGHNIISFAHDPDYRHLEEF-GVMGDVTTAMRD 400
            |.:...|:.:|||::.: |.:::..||...:...|  :.|| |.||..::.: .||.:..|.|||
  Fly   422 LRKPEAIEFIGNMLQGN-VDAMDKMFYQFWYMLAH--MYFA-DADYYQMDVYPNVMLNFETMMRD 482

  Fly   401 PIFYRWHGFIDTVFNKFKTRLNPYNAGELNFDGITVDYIEAKIGKSNTKANTLLTYWQKSSADLA 465
            |::|.::..|..|:.:|...|..|...:|...|:|:         .|.:.:.|.||:     || 
  Fly   483 PMYYMFYKSIAQVY
FQFMHYLPKYTKEQLLMPGVTM---------KNVEVSDLTTYF-----DL- 532

  Fly   466 AGLDFGPTT---------------DRNIFASFTHLQNAPFTYTFNVTNNGARRTGTCRIFICPKV 515
              :||..|.               |.::||....|.:.|||||:.:.:....:. ..|.|:.||.
  Fly   533 --VDFDVTNMLNDKMIFQDGKFVWDMSLFARQMRLNHKPFTYTYTIESEKVEKV-VIRAFLGPKF 594

  Fly   516 DERNQALNLEEQRLLAIEMDKFTVDLVPGENTIRRQSTESSVAIPFERSFRPVGADYQPKAADEL 580
            ||..:.::|.|.|:..:|:|:|..:|..|.|.|.|:|:|....:....::..: ..|...|.|  
  Fly   595 DEFGKVISLAENRMNFMEIDEFYYELKAGTNKITRKSSEFYWTVKDRTTYTEL-YYYTMMAFD-- 656

  Fly   581 ARFKF------CGCGWPQHLLLPKGNAQGMVFDLFVMISDYSQDSVEQPKTPNDACSTAYSFCGL 639
            .::.|      ..||:|..|:||.|..:||...:|.|:..|...:.||..|    ....|| ||:
  Fly   657 GKYDFPLDISEPHCGFPDRLVLPMGWQKGMPMQMFFMVVPYVAPAHEQFST----FDYTYS-CGI 716

  Fly   640 -KDKLYPDRRTMGYPFDRRL 658
             ....|.|....||||||.:
  Fly   717 GSGARYVDSLPFGYPFDRAI 736

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PPO1NP_476812.1 Hemocyanin_N 27..142 CDD:281684 16/50 (32%)
Hemocyanin_M 152..414 CDD:278784 72/341 (21%)
Hemocyanin_C 423..682 CDD:281685 72/258 (28%)
Lsp1betaNP_001285556.1 Hemocyanin_N 32..154 CDD:281684 16/51 (31%)
Hemocyanin_M 161..496 CDD:278784 72/343 (21%)
Hemocyanin_C 505..755 CDD:281685 72/258 (28%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45470657
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR11511
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
32.940

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