DRSC/TRiP Functional Genomics Resources

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Protein Alignment PPO1 and Lsp1alpha

DIOPT Version :9

Sequence 1:NP_476812.1 Gene:PPO1 / 37044 FlyBaseID:FBgn0283437 Length:690 Species:Drosophila melanogaster
Sequence 2:NP_511138.2 Gene:Lsp1alpha / 32199 FlyBaseID:FBgn0002562 Length:816 Species:Drosophila melanogaster


Alignment Length:720 Identity:173/720 - (24%)
Similarity:290/720 - (40%) Gaps:175/720 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly    69 VPSLEFTKKIGLKNQFSLFNNRHREIASELITLFMSAPNLRQFVSLSVYTKDRVNPVLFQYAYAV 133
            :|..||         |......|.:.|..|...|..|.:...|::...:.:...|..:|.||..:
  Fly    89 LPKGEF---------FGALVKHHAKQARGLFNFFYYAKDWETFMTNVAFARMHFNEGMFVYALTL 144

  Fly   134 AVAHRPDTREVPITNISQIFPSNFVEPSAFRDARQ-------EASVIGESGARVHVDIP------ 185
            ||.||.|...:.:..|.:|||..|.......:|.:       :.|:..:....|:..||      
  Fly   145 AVIHRDDFHG
LVLPAIHEIFPQFFFNSKFVMEAEKFDYEMWMKTSLYEKEYMDVYHKIPTFSSYE 209

  Fly   186 --------------------------QNYTASD------------------------------RE 194
                                      ..|..||                              ||
  Fly   210 HGYKQGMAYGYGKTHGHGQTYEHEFGSMYQTSDYMYMKDFKTWQWWKLMGLGEHWYSESNYILRE 274

  Fly   195 -----------------------------------DEQRLAYFREDIGVNSHHWHWHLVYP--TT 222
                                               :|.:|:||.||:|.||:.::.::.|.  ..
  Fly   275 NIYEYNQESNWLTMMKDVKKFYMPVDYSRDLYLYNEESKLSYFTEDLGWNSYWYYLNMDYSFFLD 339

  Fly   223 GPTEVVNKDRRGELFYYMHHQILARYNVERFCNNLKKVQPLNNLRVEVPEGYFPKILSSTNNRTY 287
            |.|..:..|||||.:.|..||:|:||::||..:.|.:: |..:...::..||.|::: ..|...|
  Fly   340 GKTFGLQNDRRGEWWLYNVHQLLSRYHMERLSHGLGEI-PQFSWFHQIEMGYDPQLI-YYNGIGY 402

  Fly   288 PARVTNQKLRDVDRHDGRVEISD-VERWRDRVLAAIDQGYVEDSSGNRIPLDEVRGIDILGNMIE 351
            ..|....:|...    |..|:.| :..::.|:...::.||.:.:.|:.|.|.:...|:|:|||::
  Fly   403 SYRKNYYELETY----GNFEMLDKITGFQQRIQNIVELGYYQTTDGHMIDLRKPESIEIIGNMLQ 463

  Fly   352 ASPVLSINYNFYGNLHNEGHNIISFAHDPDYRHLEEF-GVMGDVTTAMRDPIFYRWHGFIDTVFN 415
            .: |.:|:..|:...:...|  :.|| |..|..:|.: .||.:..|.||||:||.::..|..|:.
  Fly   464 GN-VDAIDNIFFQFWYMLAH--MYFA-DTHYYQMEVYPNVMLNFETMMRDPMFYMFYKSIAQVYF 524

  Fly   416 KFKTRLNPYNAGELNFDGITVDYIEAKIGKSNTKANTLLTYWQKSSADLAAGLDFGPTT------ 474
            :|...|..|...:|...|:|:.::|         .:.|:||:     ||   :||..|.      
  Fly   525 QFMHHLPKYTKEQLLMPGVTLKHVE---------VSELVTYF-----DL---VDFDVTNMLNGKM 572

  Fly   475 ---------DRNIFASFTHLQNAPFTYTFNVTNNGARRTGTCRIFICPKVDERNQALNLEEQRLL 530
                     |:::||....|.:.||:||:.:.:....:. ..|.|:.||.||..:.::|.:.|:.
  Fly   573 VFHEGQFLWDKSLFARQMRLNHKPFSYTYTIDSARDEKV-VIRAFLGPKFDEYGRMISLTDNRMN 636

  Fly   531 AIEMDKFTVDLVPGENTIRRQSTESSVAIPFERSFRPVGADYQPKAADELARFKF------CGCG 589
            .:|:|:||..|..|.|.|.|:||:.:..:....::..: ..|...|.|  .::.:      ..||
  Fly   637 FMEIDEFTYTLKTGSNLITRKSTDFAWTVKDRTTYTEL-YYYTMMAFD--GKYDYPLDLTEPHCG 698

  Fly   590 WPQHLLLPKGNAQGMVFDLFVMISDYSQDSVEQPKTPNDACSTAYSFCGL-KDKLYPDRRTMGYP 653
            :|..|:||.|..:||...:|.|:..|.....||..|    ....|| ||: ....:.|....|||
  Fly   699 FPDRLVLPMGWKKGMPMQMFFMVVPYMAPQHEQFST----FDYTYS-CGIGSGARHVDSLPFGYP 758

  Fly   654 FDRRL 658
            |||.:
  Fly   759 FDREI 763

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PPO1NP_476812.1 Hemocyanin_N 27..142 CDD:281684 19/72 (26%)
Hemocyanin_M 152..414 CDD:278784 81/369 (22%)
Hemocyanin_C 423..682 CDD:281685 69/258 (27%)
Lsp1alphaNP_511138.2 Hemocyanin_N 32..154 CDD:281684 19/73 (26%)
Hemocyanin_M 287..523 CDD:278784 67/245 (27%)
Hemocyanin_C 532..782 CDD:281685 69/258 (27%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45470663
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR11511
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
32.940

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