DRSC/TRiP Functional Genomics Resources

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Protein Alignment PPO1 and Lsp1alpha

DIOPT Version :10

Sequence 1:NP_476812.1 Gene:PPO1 / 37044 FlyBaseID:FBgn0283437 Length:690 Species:Drosophila melanogaster
Sequence 2:NP_511138.2 Gene:Lsp1alpha / 32199 FlyBaseID:FBgn0002562 Length:816 Species:Drosophila melanogaster


Alignment Length:721 Identity:172/721 - (23%)
Similarity:292/721 - (40%) Gaps:177/721 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly    69 VPSLEFTKKIGLKNQFSLFNNRHREIASELITLFMSAPNLRQFVSLSVYTKDRVNPVLFQYAYAV 133
            :|..||         |......|.:.|..|...|..|.:...|::...:.:...|..:|.||..:
  Fly    89 LPKGEF---------FGALVKHHAKQARGLFNFFYYAKDWETFMTNVAFARMHFNEGMFVYALTL 144

  Fly   134 AVAHRPDTREVPITNISQIFPSNFVEPSAFRDARQ-------EASVIGESGARVHVDIP------ 185
            ||.||.|...:.:..|.:|||..|.......:|.:       :.|:..:....|:..||      
  Fly   145 AVIHRDDFHG
LVLPAIHEIFPQFFFNSKFVMEAEKFDYEMWMKTSLYEKEYMDVYHKIPTFSSYE 209

  Fly   186 --------------------------QNYTASD------------------------------RE 194
                                      ..|..||                              ||
  Fly   210 HGYKQGMAYGYGKTHGHGQTYEHEFGSMYQTSDYMYMKDFKTWQWWKLMGLGEHWYSESNYILRE 274

  Fly   195 -----------------------------------DEQRLAYFREDIGVNSHHWHWHLVYP--TT 222
                                               :|.:|:||.||:|.||:.::.::.|.  ..
  Fly   275 NIYEYNQESNWLTMMKDVKKFYMPVDYSRDLYLYNEESKLSYFTEDLGWNSYWYYLNMDYSFFLD 339

  Fly   223 GPTEVVNKDRRGELFYYMHHQILARYNVERFCNNLKKVQPLNNLRVEVPEGYFPKILSSTNNRTY 287
            |.|..:..|||||.:.|..||:|:||::||..:.|.:: |..:...::..||.|::: ..|...|
  Fly   340 GKTFGLQNDRRGEWWLYNVHQLLSRYHMERLSHGLGEI-PQFSWFHQIEMGYDPQLI-YYNGIGY 402

  Fly   288 PARVTNQKLRDVDRHDGRVEISD-VERWRDRVLAAIDQGYVEDSSGNRIPLDEVRGIDILGNMIE 351
            ..|....:|...    |..|:.| :..::.|:...::.||.:.:.|:.|.|.:...|:|:|||::
  Fly   403 SYRKNYYELETY----GNFEMLDKITGFQQRIQNIVELGYYQTTDGHMIDLRKPESIEIIGNMLQ 463

  Fly   352 ASPVLSINYNFYGNLHNEGHNIISFAHDPDYRHLEEF-GVMGDVTTAMRDPIFYRWHGFIDTVFN 415
            .: |.:|:..|:...:...|  :.|| |..|..:|.: .||.:..|.||||:||.::..|..|:.
  Fly   464 GN-VDAIDNIFFQFWYMLAH--MYFA-DTHYYQMEVYPNVMLNFETMMRDPMFYMFYKSIAQVYF 524

  Fly   416 KFKTRLNPYNAGELNFDGITVDYIEAKIGKSNTKANTLLTYWQKSSADLAAGLDFGPTT------ 474
            :|...|..|...:|...|:|:.::|         .:.|:||:     ||   :||..|.      
  Fly   525 QFMHHLPKYTKEQLLMPGVTLKHVE---------VSELVTYF-----DL---VDFDVTNMLNGKM 572

  Fly   475 ---------DRNIFASFTHLQNAPFTYTFNVTNNGARRTGTCRIFICPKVDERNQALNLEEQRLL 530
                     |:::||....|.:.||:||:.:.:....:. ..|.|:.||.||..:.::|.:.|:.
  Fly   573 VFHEGQFLWDKSLFARQMRLNHKPFSYTYTIDSARDEKV-VIRAFLGPKFDEYGRMISLTDNRMN 636

  Fly   531 AIEMDKFTVDLVPGENTIRRQSTESSVAIPFERSFRPVGADYQPKAADELARFKF------CGCG 589
            .:|:|:||..|..|.|.|.|:||:.:..:....::..: ..|...|.|  .::.:      ..||
  Fly   637 FMEIDEFTYTLKTGSNLITRKSTDFAWTVKDRTTYTEL-YYYTMMAFD--GKYDYPLDLTEPHCG 698

  Fly   590 WPQHLLLPKGNAQGMVFDLFVMISDYSQDSVEQPKTPNDACSTAYSF-CGL-KDKLYPDRRTMGY 652
            :|..|:||.|..:||...:|.|:..|.....||..|.:      |:: ||: ....:.|....||
  Fly   699 FPDRLVLPMGWKKGMPMQMFFMVVPYMAPQHEQFSTFD------YTYSCGIGSGARHVDSLPFGY 757

  Fly   653 PFDRRL 658
            ||||.:
  Fly   758 PFDREI 763

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PPO1NP_476812.1 Hemocyanin_N 27..142 CDD:461025 19/72 (26%)
Hemocyanin_M 149..414 CDD:459787 82/372 (22%)
Hemocyanin_C 423..681 CDD:461026 68/259 (26%)
Lsp1alphaNP_511138.2 Hemocyanin_N 32..154 CDD:461025 19/73 (26%)
Hemocyanin_M 287..523 CDD:459787 67/245 (27%)
Hemocyanin_C 532..781 CDD:461026 68/259 (26%)

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