DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Mapmodulin and LEA1

DIOPT Version :10

Sequence 1:NP_001097361.1 Gene:Mapmodulin / 37043 FlyBaseID:FBgn0034282 Length:363 Species:Drosophila melanogaster
Sequence 2:NP_015111.1 Gene:LEA1 / 855888 SGDID:S000006134 Length:238 Species:Saccharomyces cerevisiae


Alignment Length:215 Identity:54/215 - (25%)
Similarity:81/215 - (37%) Gaps:39/215 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly    21 NLDNCRSTSIVGLTDEYTALES-----------LSLINVGLTTLKGFPKLPNLKKLELSDNRISS 74
            |:|.|.....:.|..:..::.|           |.|.|..|..:....:..::..|.|..|.|..
Yeast    24 NVDKCVILRDLQLETDSESMPSSLKHLTKPTHILDLTNNDLIMIPDLSRRDDIHTLLLGRNNIVE 88

  Fly    75 GLNYLTTSPKLQYLNLSGNKIKDLETLKPLEE----FKNLVVLDLFNNDATQVDNYREKIFKMLP 135
             ::.......:|.|.||.|.|:..|.|:.|..    .|||.   |..|....:.||||.:.:::|
Yeast    89 -VDGRLLPMNVQNLTLSNNSIRRFEDLQRLRRAPRTLKNLT---LIGNQVCHLANYREHVLRLVP 149

  Fly   136 SLNFLDGFDCNDEE--------VQSDGDDDDEVN----GNDSDE--------VGDKCNAFCLNGL 180
            .|..||..:...||        .|:|||....||    .|.|.:        |..|......|.|
Yeast   150 HLETLDFQNVTAEERKSAMSFPRQADGDTLGPVNTAIRDNGSRDKTMEIMNLVVSKMTVERRNEL 214

  Fly   181 EIDLDELEAFEKRVKAKKSL 200
            :..|.|..:.|:..:.:|.|
Yeast   215 KKQLAEATSLEEIARLEKLL 234

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
MapmodulinNP_001097361.1 PPP1R42 15..142 CDD:455733 34/135 (25%)
leucine-rich repeat 17..39 CDD:275380 4/17 (24%)
leucine-rich repeat 40..61 CDD:275380 5/31 (16%)
leucine-rich repeat 62..84 CDD:275380 4/21 (19%)
leucine-rich repeat 85..109 CDD:275380 9/27 (33%)
leucine-rich repeat 110..136 CDD:275380 7/25 (28%)
LEA1NP_015111.1 leucine-rich repeat 54..75 CDD:275378 4/20 (20%)
LRR_9 <57..179 CDD:405295 36/125 (29%)
leucine-rich repeat 76..97 CDD:275378 4/21 (19%)
leucine-rich repeat 98..116 CDD:275378 8/17 (47%)
leucine-rich repeat 117..150 CDD:275378 10/35 (29%)

Return to query results.
Submit another query.