DRSC/TRiP Functional Genomics Resources

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Protein Alignment Mapmodulin and T19H12.2

DIOPT Version :10

Sequence 1:NP_001097361.1 Gene:Mapmodulin / 37043 FlyBaseID:FBgn0034282 Length:363 Species:Drosophila melanogaster
Sequence 2:NP_504310.2 Gene:T19H12.2 / 178881 WormBaseID:WBGene00020588 Length:228 Species:Caenorhabditis elegans


Alignment Length:243 Identity:82/243 - (33%)
Similarity:123/243 - (50%) Gaps:49/243 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MEKRIELERRARKVNQITELNLDNCRSTSIVGLTDEYTALESLSLINVGLTTLKGFPKLPNLKKL 65
            ||:....|.|.|:...:..|.|||.:...|.|:.::.|.||.||::..|||||||.|.||.|..|
 Worm     4 MEEVYASELRGREPETVDTLFLDNTQGGVIGGINEKLTKLELLSMVKCGLTTLKGMPVLPALNYL 68

  Fly    66 ELSDNRISSGLNY---LTTSPKLQYLNLSGNKIKDLETLKPLEEFKNLVVLDLFNNDAT-QVDNY 126
            :||||.:....::   :..:|:::.:.||||:: .|:.::.|:...||:.|||.||.:. .:|:|
 Worm    69 DLSDNELGDDASFDVLIKCAPEIKKITLSGNRL-TLDNVRTLKMLPNLMELDLSNNSSLGLLDDY 132

  Fly   127 REKIFKMLPSLNFLDGFDCNDEEVQSD------GDDDDEVNGNDSDEVGDKCNAFCLNGLEIDLD 185
            |.|:|:|:|||..|||.|.:.|||:.:      .:|.||   .||||.|...:  .||       
 Worm   133 RVKMFEMIPSLKILDGCDVDGEEVEEEFAAGEGAEDSDE---GDSDEDGPGLS--YLN------- 185

  Fly   186 ELEAFEKRVKAKKSLQDKPPPQSEDKEVDELDEYLKELQLRESTDAST 233
                       |....|           ||.|:|:    :.|:.||.|
 Worm   186 -----------KSQFSD-----------DETDDYV----VPEAGDAET 207

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
MapmodulinNP_001097361.1 PPP1R42 15..142 CDD:455733 51/130 (39%)
leucine-rich repeat 17..39 CDD:275380 6/21 (29%)
leucine-rich repeat 40..61 CDD:275380 13/20 (65%)
leucine-rich repeat 62..84 CDD:275380 6/24 (25%)
leucine-rich repeat 85..109 CDD:275380 6/23 (26%)
leucine-rich repeat 110..136 CDD:275380 12/26 (46%)
T19H12.2NP_504310.2 leucine-rich repeat 22..42 CDD:275378 6/19 (32%)
PPP1R42 <43..151 CDD:455733 46/108 (43%)
leucine-rich repeat 43..64 CDD:275378 13/20 (65%)
leucine-rich repeat 65..90 CDD:275378 6/24 (25%)
leucine-rich repeat 91..114 CDD:275378 6/23 (26%)

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