DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG14490 and ARC3

DIOPT Version :10

Sequence 1:NP_611274.1 Gene:CG14490 / 37041 FlyBaseID:FBgn0034281 Length:197 Species:Drosophila melanogaster
Sequence 2:NP_177638.2 Gene:ARC3 / 843839 AraportID:AT1G75010 Length:741 Species:Arabidopsis thaliana


Alignment Length:140 Identity:40/140 - (28%)
Similarity:65/140 - (46%) Gaps:5/140 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 SGVRSQRYPGGQYQGKWLGQQPHGFGVKQTSSGLVYEGHWQKGQRHGIGSLRRKELDGRMERIYV 74
            |.:...:|.||.::|:..|..|.|.|......|.:|:|.|..|:|.|:|:...|..|     ::.
plant   595 SPILEMQYRGGLFKGRCQGGLPEGKGRLVLGDGSIYDGMWHNGKRSGLGTFYFKNGD-----VFQ 654

  Fly    75 GQWRENKRSGEGKQFYPDGSVYFGQWLADQRSGEGILWQADGGIYVGEWLRDKMHEKGLLFTATG 139
            |.|||:...|:|..::..|..:|..:...:.||||..:...|.|:.|.:.....|.:.|.....|
plant   655 GTWREDLIHGKGWFYFHKGDRWFANFWKGKASGEGRFYSKSGEIFFGHFKDGWRHGQFLCIDLDG 719

  Fly   140 NRYVGQFEGG 149
            .||...::.|
plant   720 TRYSETWDDG 729

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG14490NP_611274.1 COG4642 <18..173 CDD:443680 38/132 (29%)
ARC3NP_177638.2 Tubulin_FtsZ_Cetz-like <163..361 CDD:471962
COG4642 <604..728 CDD:443680 37/128 (29%)
Blue background indicates that the domain is not in the aligned region.

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