DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG14490 and Als2

DIOPT Version :10

Sequence 1:NP_611274.1 Gene:CG14490 / 37041 FlyBaseID:FBgn0034281 Length:197 Species:Drosophila melanogaster
Sequence 2:NP_001013431.1 Gene:Als2 / 363235 RGDID:1310372 Length:1651 Species:Rattus norvegicus


Alignment Length:221 Identity:62/221 - (28%)
Similarity:91/221 - (41%) Gaps:37/221 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 SRTSGYSSGVRSQRYPGGQYQGKWLGQQPHGFGVKQTSSGLVYEGHWQKGQRHGIGSLRRKELDG 67
            ||::.|:. .:..|.....|.|:||..:|||.||.:...|.||.|.::.|...|.|..|......
  Rat  1025 SRSAKYTF-YKDTRLKDATYDGRWLSGKPHGRGVLKWPDGKVYSGTFRNGLEDGYGEYRIPNKAL 1088

  Fly    68 RMERIYVGQWRENKRSGEGKQFYPDG----------------------------SVYFGQWLADQ 104
            ..|..|||.|:|.|..|:|...|..|                            |::.|||:.|:
  Rat  1089 NKEDHYVGHWKEGKMCGQGVYSYASGEVFEGCFQDNMRHGHGLLRSGKLTSSSPSMFIGQWVMDK 1153

  Fly   105 RSGEGILWQ-ADGGIYVGEWLRDKMHEKGLLFTATGNRYVGQFEGGCKSGSGVFYHASNGQRIQH 168
            ::|.|:... ..|..|:|.|..|.....|::.|..|..|.|.|......|:||.  .|....|..
  Rat  1154 KAGYGVFDDITRGEKYMGMWQDDACQGNGVVVTQFGLYYEGNFHLNKMMGNGVL--LSEDDTIYE 1216

  Fly   169 GFWSKD--ICRTSLLSLPQDKNNEFM 192
            |.:|.|  :|....|::|   |.:::
  Rat  1217 GEFSDDWTLCGKGTLTMP---NGDYI 1239

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG14490NP_611274.1 COG4642 <18..173 CDD:443680 52/183 (28%)
Als2NP_001013431.1 ATS1 <18..219 CDD:444065
RCC1 1 59..108
RCC1 2 109..167
RCC1 3 169..218
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 444..476
RCC1 4 519..570
ATS1 522..>622 CDD:444065
RCC1 5 572..621
RhoGEF 689..873 CDD:470622
PH_alsin 899..1004 CDD:241423
COG4642 <1012..1243 CDD:443680 62/221 (28%)
MORN 1 1043..1065 10/21 (48%)
MORN 2 1066..1088 6/21 (29%)
MORN 3 1094..1116 10/21 (48%)
MORN 4 1117..1139 0/21 (0%)
MORN 5 1145..1167 6/21 (29%)
MORN 6 1169..1191 7/21 (33%)
MORN 7 1192..1214 7/23 (30%)
MORN 8 1215..1238 7/25 (28%)
VPS9 1546..1650 CDD:460489
Blue background indicates that the domain is not in the aligned region.

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