DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG14490 and Als2cl

DIOPT Version :10

Sequence 1:NP_611274.1 Gene:CG14490 / 37041 FlyBaseID:FBgn0034281 Length:197 Species:Drosophila melanogaster
Sequence 2:XP_038938579.1 Gene:Als2cl / 316017 RGDID:1305208 Length:952 Species:Rattus norvegicus


Alignment Length:222 Identity:63/222 - (28%)
Similarity:86/222 - (38%) Gaps:51/222 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 SRTSGYSSGVRSQRYPGGQ------YQGKWLGQQPHGFG---VKQTSS----------------- 41
            ||...:..|  :.::|.|:      |||     ..||||   |.|.|.                 
  Rat   363 SRAKPHGKG--TLKWPDGRNHVGDFYQG-----LEHGFGICLVPQASEDKFDCYKCHWREGRMCE 420

  Fly    42 -GL-------VYEGHWQKGQRHGIGSLRRKELDGRMERIYVGQWRENKRSGEGKQFYPD-GSVYF 97
             |:       ||:|::|.|.|||.|.|.......:..| |.|.|...:|||.|.:...| |..|.
  Rat   421 YGICEYGTDEVYKGYFQAGVRHGFGVLDSAPQAPQPFR-YTGHWERGQRSGYGIEEDRDRGERYI 484

  Fly    98 GQWLADQRSGEGILWQADGGIYVGEWLRDKMHEKGLLFTATGNRYVGQF--------EGGCKSGS 154
            |.|.||||.|.||:....|..|.|.:..|||...|:|.....:.|.|.|        :|.....:
  Rat   485 GMWQADQRHGPGIVVTQAGVCYQGTFQGDKMAGPGILLCEDDSLYEGTFTRELTLLGKGKVTFPN 549

  Fly   155 GVFYHASNGQRIQHGFWSKDICRTSLL 181
            |.....|.......|.:::.:..|:.|
  Rat   550 GFTLEGSFCSGTDKGLYTQGVLDTTAL 576

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG14490NP_611274.1 COG4642 <18..173 CDD:443680 58/197 (29%)
Als2clXP_038938579.1 PH-like 223..321 CDD:473070
COG4642 <358..557 CDD:443680 59/201 (29%)
VPS9 835..937 CDD:473191
Blue background indicates that the domain is not in the aligned region.

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