DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG14490 and Rsph10b

DIOPT Version :10

Sequence 1:NP_611274.1 Gene:CG14490 / 37041 FlyBaseID:FBgn0034281 Length:197 Species:Drosophila melanogaster
Sequence 2:XP_006248920.1 Gene:Rsph10b / 288478 RGDID:1311893 Length:906 Species:Rattus norvegicus


Alignment Length:196 Identity:60/196 - (30%)
Similarity:83/196 - (42%) Gaps:50/196 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly    19 GGQYQGKWLGQQPHGFGV-KQTSSGLVYEGHWQKGQRHGIGSLRRKELDGRMERIYVGQWRENKR 82
            |..|:|:.:....:|||: |..:..:.|.|||..|:|||.||:...: :|  ...|.|.|..|.:
  Rat   182 GSTYEGEVVNGMRNGFGMFKCGTQPVSYIGHWCHGKRHGKGSIYYNQ-EG--TSWYEGDWVYNIK 243

  Fly    83 SGEGKQFYPDGSVYFGQWLADQRSGEG-ILWQADGGIYVGEWLRDKMHEKGL---LFTAT----- 138
            .|.|.:.|..|::|.|||..:.|.||| :.|......|.|.|      |||:   ..|.|     
  Rat   244 KGWGIRCYKSGNIYEGQWENNMRHGEGRMRWLTTNEEYTGHW------EKGIQNGFGTHTWFLKR 302

  Fly   139 --------GNRYVGQFEGGCKSGSGVFYHAS----------------------NGQRIQHGFWSK 173
                    .|.|:|.|..|.:.|.|.||:||                      || |:..|.:|.
  Rat   303 IPNSQYPLRNEYIGAFVNGFRHGQGKFYYASGAMYEGEWVSNKKQGRGRITFKNG-RVYEGLFSN 366

  Fly   174 D 174
            |
  Rat   367 D 367

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG14490NP_611274.1 COG4642 <18..173 CDD:443680 58/193 (30%)
Rsph10bXP_006248920.1 COG4642 73..366 CDD:443680 58/193 (30%)

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