DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG14490 and Pms2

DIOPT Version :10

Sequence 1:NP_611274.1 Gene:CG14490 / 37041 FlyBaseID:FBgn0034281 Length:197 Species:Drosophila melanogaster
Sequence 2:XP_036020772.1 Gene:Pms2 / 18861 MGIID:104288 Length:875 Species:Mus musculus


Alignment Length:174 Identity:56/174 - (32%)
Similarity:80/174 - (45%) Gaps:29/174 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    19 GGQYQGKWLGQQPHGFGV-KQTSSGLVYEGHWQKGQRHGIGSLRRKELDGRMERIYVGQWRENKR 82
            |..|:|:......:|||: |..:..:.|.|||..|:|||.||:...: :|  ...|.|.|..|.:
Mouse   152 GSTYEGEVTNGMRNGFGMFKCGTQPVSYIGHWCHGKRHGKGSIYYNQ-EG--TSWYEGDWVYNIK 213

  Fly    83 SGEGKQFYPDGSVYFGQWLADQRSGEG-ILWQADGGIYVGEWLRDKMHEKGL---LFTAT----- 138
            .|.|.:.|..|::|.|||..:.|.||| :.|......|.|.|      |||:   ..|.|     
Mouse   214 KGWGIRCYKSGNIYEGQWENNMRHGEGRMRWLTTNEEYTGHW------EKGIQNGFGTHTWFLKR 272

  Fly   139 --------GNRYVGQFEGGCKSGSGVFYHASNGQRIQHGFWSKD 174
                    .|.|:|:|..|.:.|.|.||:||..  :..|.|:.:
Mouse   273 IPNSQYPLRNEYIGEFVNGFRHGQGKFYYASGA--MYEGEWASN 314

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG14490NP_611274.1 COG4642 <18..173 CDD:443680 56/171 (33%)
Pms2XP_036020772.1 COG4642 <86..336 CDD:443680 56/174 (32%)
vATP-synt_E 782..>829 CDD:419987
Blue background indicates that the domain is not in the aligned region.

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