DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment grh and UBP1

DIOPT Version :9

Sequence 1:NP_476845.2 Gene:grh / 37038 FlyBaseID:FBgn0259211 Length:1333 Species:Drosophila melanogaster
Sequence 2:NP_001121633.1 Gene:UBP1 / 7342 HGNCID:12507 Length:540 Species:Homo sapiens


Alignment Length:542 Identity:120/542 - (22%)
Similarity:210/542 - (38%) Gaps:131/542 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly   881 HDF-------------GRQNDADKIQIPKIF-------------TNVGFRYHLESPISSSQRRED 919
            |||             |..:.:|.:.:| ||             .:..|:|.:.:..|.:.:..|
Human    17 HDFDASLSGIGQELGAGAYSMSDVLALP-IFKQEDSSLPLDGETEHPPFQYVMCAATSPAVKLHD 80

  Fly   920 DRITYINKGQFYGI-TLEYVHDAEKP-IKNTTVKSVIMLMFREEK---SPEDEIKAWQFWHSRQH 979
            :.:||:|:||.|.| .|:.....:.| |....|||:|.::|.:.:   :...:::.|: |    :
Human    81 ETLTYLNQGQSYEIRMLDNRKMGDMPEINGKLVKSIIRVVFHDRRLQYTEHQQLEGWK-W----N 140

  Fly   980 SVKQRILDADTKNSVGLVGCIEEVSH-NAIAVYWNPLESSAKINIAVQCLSTDFSSQK--GVKGL 1041
            ....|:||.|...|||::......|. ||:...|:|.:.::.. |.|.|:||:|:.:|  |.||:
Human   141 RPGDRLLDLDIPMSVGIIDTRTNPSQLNAVEFLWDPAKRTSAF-IQVHCISTEFTPRKHGGEKGV 204

  Fly  1042 PLHVQIDTF---EDPRDTAVFHRGYCQIKVFCDKGAERKTRDEERRAAKRKMTATGRKKLDELY- 1102
            |..:|:|||   |:...|...|...||||||..|||:||.:.:..:..||  ||..::|....| 
Human   205 PFRIQVDTFKQNENGEYTDHLHSASCQIKVFKPKGADRKQKTDREKMEKR--TAHEKEKYQPSYD 267

  Fly  1103 ---------HPVTDRSEFYGMQDFAKPPVLFSPAEDMEKVGQLGI-----GAATGMTFNPLSNGN 1153
                     .|:.:.:..:..:..:|..:   ||:..:.:.:.|.     .|.|....|..|...
Human   268 TTILTEMRLEPIIEDAVEHEQKKSSKRTL---PADYGDSLAKRGSCSPWPDAPTAYVNNSPSPAP 329

  Fly  1154 SNSNSHSSLQSFYGHETDSPDLKGASPFLLHGQKV------------------ATPTLKFHNHFP 1200
            :.::...|..|.....:.||:.:|.......|:::                  ::.|..|.|...
Human   330 TFTSPQQSTCSVPDSNSSSPNHQGDGASQTSGEQIQPSATIQETQQWLLKNRFSSYTRLFSNFSG 394

  Fly  1201 PDMQTDKKDHILD----------QNMLTSTPLTDFGPPMKRGRMTPPTSERVMLYVRQENEE--- 1252
            .|:....|:.::.          .|.|.|             |...|   |:.:||.:|...   
Human   395 ADLLKLTKEDLVQICGAADGIRLYNSLKS-------------RSVRP---RLTIYVCREQPSSTV 443

  Fly  1253 --------------------VYTPLHVVPPTTIGLLNAIENKYKISTTSINNIYRTNKKGITAKI 1297
                                ||..:::.......:...:...:.|....||.:||....||...:
Human   444 LQGQQQAASSASENGSGAPYVYHAIYLEEMIASEVARKLALVFNIPLHQINQVYRQGPTGIHILV 508

  Fly  1298 DDDMISFYCNEDIFLLEVQQIE 1319
            .|.|:..:.:|..||....:.|
Human   509 SDQMVQNFQDESCFLFSTVKAE 530

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
grhNP_476845.2 CP2 903..1089 CDD:282385 63/196 (32%)
UBP1NP_001121633.1 CP2 54..254 CDD:282385 62/205 (30%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 236..270 11/35 (31%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 285..368 14/85 (16%)
SAM_LBP1 369..435 CDD:188987 12/81 (15%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG4091
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
21.810

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