DRSC/TRiP Functional Genomics Resources

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Protein Alignment grh and Grhl3

DIOPT Version :9

Sequence 1:NP_476845.2 Gene:grh / 37038 FlyBaseID:FBgn0259211 Length:1333 Species:Drosophila melanogaster
Sequence 2:NP_001013778.1 Gene:Grhl3 / 230824 MGIID:2655333 Length:603 Species:Mus musculus


Alignment Length:570 Identity:171/570 - (30%)
Similarity:254/570 - (44%) Gaps:140/570 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly   819 NIQQSFDYTELCQPGTLIDANGSIPV--SVNSI-----QQRTAVHGSQNSPTTSLVDTSTNGSTR 876
            |:..|.|||:..:...|:...|.:|.  ..|::     :...:...|...|.:.:.|   |||..
Mouse   116 NVSGSPDYTDQLKKNNLLGLEGVLPTPGKTNTVPPGPSKLEASSMDSYLLPASDIYD---NGSLN 177

  Fly   877 S-----------RPWHDFGRQNDA---DKIQIPKIFTNV------------------GFRYHLES 909
            |           :.|     |.|:   |..|...:|.::                  .|.|.|.|
Mouse   178 SLFESIHGVPPTQRW-----QPDSTFKDDPQESLLFPDILKTSPDPPCPEDYPGLKSDFEYTLGS 237

  Fly   910 PISSSQRREDDRITYINKGQFYGITLEYVHDAE-KPIKNTTVKSVIMLMFREEKSPEDEIKAWQF 973
            |.:...:..:..:.|:||||||.:||......: ..:.::.||||:|::|..:|.|.::::.|:.
Mouse   238 PKAIHIKAGESPMAYLNKGQFYPVTLRTPAGGKGLALSSSKVKSVVMVVFDNDKVPVEQLRFWRH 302

  Fly   974 WHSRQHSVKQRILD-ADTKNSVGLVGCIEEVSHNAIAVYWNPLESSAKINIAVQCLSTDFSSQKG 1037
            |||||.:.|||::| ||.|.:...|..||||::||::..|| :...||:.|.|.|||||||||||
Mouse   303 WHSRQPTAKQRVIDVADCKENFNTVQHIEEVAYNALSFVWN-VNEEAKVFIGVNCLSTDFSSQKG 366

  Fly  1038 VKGLPLHVQIDTFEDPRDT-AVFHRGYCQIKVFCDKGAERKTRDEERRAAKRKMTA--------- 1092
            |||:||::||||::....| .:.||..||||:|||||||||.||:||:..:||:..         
Mouse   367 VKGVPLNLQIDTYDCGAGTERLVHRAVCQIKIFCDKGAERKMRDDERKQFRRKVKCPDSSNNAGI 431

  Fly  1093 -----TGRKKLDELY-HPVTDRSEFYGMQDFAKPPVLFSPAEDMEKVGQLGIGAATGMTFNPLSN 1151
                 :|.:..:..| .|.|         |....||||.|                         
Mouse   432 KGCLLSGFRGNETTYLRPET---------DLETQPVLFIP------------------------- 462

  Fly  1152 GNSNSNSH-SSLQSFYGHETDSPDLKGASPFLLHGQKVATPTLKFHNHFPPDMQTDKKDHILDQN 1215
                 |.| ||||        .|.  |..|...|......|..:                     
Mouse   463 -----NLHFSSLQ--------RPG--GVVPSAGHSSSDRLPLKR--------------------- 491

  Fly  1216 MLTSTPLTDFGPPMKRGRMTPPTSERVMLYVRQENEEVYTPLHVVPPTTIGLLNAIENKYKISTT 1280
              |.:|..:...|:...:......:||:||||:|.|||:..|.:..|...||.|||..||.:...
Mouse   492 --TCSPFAEEFEPLPSKQAKEDDLQRVLLYVRRETEEVFDALMLKTPDLKGLRNAISEKYGLPEE 554

  Fly  1281 SINNIYRTNKKGITAKIDDDMISFYCNEDIFLLEVQQIEDDLYDVTLTEL 1330
            :|..:|:..|:||...:|:::|..|.|...|||::.:: |....:.|.||
Mouse   555 NICKVYKKCKRGILVNMDNNIIQHYSNHVAFLLDMGEL-DGKIQIILKEL 603

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
grhNP_476845.2 CP2 903..1089 CDD:282385 88/188 (47%)
Grhl3NP_001013778.1 Transcription activation. /evidence=ECO:0000250|UniProtKB:Q8TE85 30..95
CP2 213..421 CDD:282385 90/208 (43%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 200 1.000 Domainoid score I3026
eggNOG 1 0.900 - - E1_KOG4091
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0001445
OrthoInspector 1 1.000 - - otm43259
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11037
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X907
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
87.910

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