DRSC/TRiP Functional Genomics Resources

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Protein Alignment grh and grh-1

DIOPT Version :10

Sequence 1:NP_476845.2 Gene:grh / 37038 FlyBaseID:FBgn0259211 Length:1333 Species:Drosophila melanogaster
Sequence 2:NP_490837.2 Gene:grh-1 / 190048 WormBaseID:WBGene00001707 Length:563 Species:Caenorhabditis elegans


Alignment Length:624 Identity:234/624 - (37%)
Similarity:323/624 - (51%) Gaps:165/624 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly   743 SVHHHQQQQQQQQQHQQ------------QQQQQQHHQQQQHHSQDG--KSNGGATPLYAKAIT- 792
            :|:::||....|.|:.|            |.:.:........:|..|  :|:....|.|.:.:| 
 Worm    66 NVYNNQQILYAQTQNFQYPSTLLTNGSLAQTEWRGQQMDTSAYSNTGYSRSSTSQQPQYTQQVTE 130

  Fly   793 ---AAGLTVDLPSP-DSGIGTD--AITPRDQTNIQQSFDYTELCQPGTLIDANGSIPVSVNSIQQ 851
               .....||:||| |||||.|  .:.|::        ::......|::::.:          .:
 Worm   131 NERIVYKPVDMPSPVDSGIGGDISILNPKE--------EFFTSADGGSMLERS----------SE 177

  Fly   852 RTAVHGSQNSPTTSLVDTSTNGSTRSRPWHDFGRQNDADKIQIPKIFTNVGFRYHLESPISSSQR 916
            ||..|  ::||                             :.|||::.|:||:|.||:|||:|.|
 Worm   178 RTLSH--RDSP-----------------------------LVIPKLYNNLGFQYVLEAPISTSVR 211

  Fly   917 REDDRITYINKGQFYGITLEYVHDAEKPIKNTTVKSVIMLMFREEKSPEDEIKAWQFWHSRQHSV 981
            |:|||:||:||||||.::|||..|..|.:|:.||||.:|::|||:|:.|:|||.||.||:|||..
 Worm   212 RDDDRMTYVNKGQFYTVSLEYTPDLNKCLKSQTVKSQLMVVFREDKTYEEEIKTWQSWHARQHVS 276

  Fly   982 KQRILDADTKNSVGLVGCIEEVSHNAIAVYWNPLE-SSAKINIAVQCLSTDFSSQKGVKGLPLHV 1045
            |||||:.|:|||.|::|.|||:.:||:..||||.: |..:|:|||||||||||:|||||||||||
 Worm   277 KQRILEIDSKNSSGMIGQIEEIGNNAVQFYWNPSDPSGVRISIAVQCLSTDFSTQKGVKGLPLHV 341

  Fly  1046 QIDTFEDPRDTAVFHRGYCQIKVFCDKGAERKTRDEERRAAKRKM---TA----TGRKKLDELYH 1103
            ||||::...|...|||||||||||||||||||.|||::||.|||:   ||    .||||.|..||
 Worm   342 QIDTYDGENDKVPFHRGYCQIKVFCDKGAERKLRDEDKRAQKRKVQEYTAGALPGGRKKSDGEYH 406

  Fly  1104 PVTDRSEFYGMQDFAKPPVLFSPAEDMEKVGQLGIGAATGMTFNPLSNGNSNSNSHSSLQSFYGH 1168
            ...:|||||.|::..||..||...|:.|.                                   .
 Worm   407 DQCERSEFYHMRELDKPAALFIAPEEFEP-----------------------------------R 436

  Fly  1169 ETDSPDLKGASPFLLHGQKVATPTLKFHNHFPPDMQTDKKDHILDQNMLTSTPLTDFGP-PMKRG 1232
            ..||..|                                           |..:::..| |.|| 
 Worm   437 YVDSTSL-------------------------------------------SFDMSEIEPIPTKR- 457

  Fly  1233 RMTPPTSERVMLYVRQENEEVYTPLHVVPPTTIGLLNAIENKYKISTTSINNIYRTNKKGITAKI 1297
               |.||||:|||||:.:|::|.||||||.:..||..||.||:......::.:|:...||||.|:
 Worm   458 ---PRTSERIMLYVRKRDEQIYQPLHVVPASLSGLALAIANKFGADPDKMSGVYKRCAKGITVKV 519

  Fly  1298 DDDMISFYCNEDIFLLEVQQIEDDLYDVTLTEL----PN 1332
            ||:|:..|||||.|:::|:...|.....||.|:    ||
 Worm   520 DDEMLRLYCNEDTFIIDVEHATDGSTAATLIEVAPTNPN 558

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
grhNP_476845.2 CP2 903..1089 CDD:461338 121/186 (65%)
grh-1NP_490837.2 CP2 198..385 CDD:461338 121/186 (65%)

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