DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Dhit and rgs3

DIOPT Version :10

Sequence 1:NP_611271.3 Gene:Dhit / 37037 FlyBaseID:FBgn0028743 Length:274 Species:Drosophila melanogaster
Sequence 2:XP_002941346.1 Gene:rgs3 / 100486204 XenbaseID:XB-GENE-5900212 Length:330 Species:Xenopus tropicalis


Alignment Length:128 Identity:63/128 - (49%)
Similarity:94/128 - (73%) Gaps:0/128 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly   130 QPTLEEIRSWGKSFDKLMKSTAGRKVFQNFLRSEFSEENILFWLACEDLKKENSPELVEEKARLI 194
            :|:::::.|||||.:.|:..|.||.:|:.||:||||:||:.||||||:.|..:...::..:||.|
 Frog   195 RPSIDDVTSWGKSLENLLSHTYGRALFRVFLQSEFSDENLDFWLACEEYKDTHPNFILHSRARKI 259

  Fly   195 YEDYISILSPREVSLDSRVREIVNRNMIEPTTHTFDEAQIQIYTLMHRDSYPRFLNSQKFKTL 257
            |:.||::.||:||:||:..||:...|::.||..||||||.:||.||.||||||||.|..:::|
 Frog   260 YQLYIALQSPKEVNLDASTREMTEHNLLIPTRTTFDEAQRRIYGLMERDSYPRFLRSDLYQSL 322

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
DhitNP_611271.3 RGS_RZ-like 139..256 CDD:188673 60/116 (52%)
rgs3XP_002941346.1 RGS_RGS3 208..321 CDD:188668 56/112 (50%)

Return to query results.
Submit another query.