DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ubc10 and UBC1

DIOPT Version :9

Sequence 1:NP_477414.1 Gene:Ubc10 / 37035 FlyBaseID:FBgn0026316 Length:154 Species:Drosophila melanogaster
Sequence 2:NP_010462.3 Gene:UBC1 / 851757 SGDID:S000002584 Length:215 Species:Saccharomyces cerevisiae


Alignment Length:153 Identity:52/153 - (33%)
Similarity:84/153 - (54%) Gaps:5/153 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MTAPRRLRKELSDLQGN--ALKSFRDIKADDDNLLRWTGLIVPDNPPYNKGAFRIEINFPAEYPF 63
            |:..:|:.||:..::.:  |..:...:...|.:.|:.| .:.|...||..|.|.::|..|.||||
Yeast     1 MSRAKRIMKEIQAVKDDPAAHITLEFVSESDIHHLKGT-FLGPPGTPYEGGKFVVDIEVPMEYPF 64

  Fly    64 KPPKINFKTRIYHPNIDE-KGQVCLPIISTENWKPATRTDQVVQALVDLINDPEPEHPLRAELAE 127
            ||||:.|.|::|||||.. .|.:||.|:... |.|.......:.:|..|:..|||..|..||:|:
Yeast    65 KPPKMQFDTKVYHPNISSVTGAICLDILKNA-WSPVITLKSALISLQALLQSPEPNDPQDAEVAQ 128

  Fly   128 EFLKDRKKFVKNAEDYTKKHSEK 150
            .:|:||:.|.|.|..:|:.::.:
Yeast   129 HYLRDRESFNKTAALWTRLYASE 151

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ubc10NP_477414.1 UQ_con 6..144 CDD:395127 50/140 (36%)
UBC1NP_010462.3 COG5078 1..151 CDD:227410 52/151 (34%)
UBA_3 161..215 CDD:117832
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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