DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Ubc10 and UBE2D4

DIOPT Version :9

Sequence 1:NP_477414.1 Gene:Ubc10 / 37035 FlyBaseID:FBgn0026316 Length:154 Species:Drosophila melanogaster
Sequence 2:XP_024302563.1 Gene:UBE2D4 / 51619 HGNCID:21647 Length:192 Species:Homo sapiens


Alignment Length:146 Identity:57/146 - (39%)
Similarity:88/146 - (60%) Gaps:15/146 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 ELSDLQGNALKSFRDIKAD------DDNLLRWTGLIV-PDNPPYNKGAFRIEINFPAEYPFKPPK 67
            ||:|||       ||..|.      .|:|..|...|: |::.||..|.|.:.|:||.:|||||||
Human    54 ELTDLQ-------RDPPAQCSAGPVGDDLFHWQATIMGPNDSPYQGGVFFLTIHFPTDYPFKPPK 111

  Fly    68 INFKTRIYHPNIDEKGQVCLPIISTENWKPATRTDQVVQALVDLINDPEPEHPLRAELAEEFLKD 132
            :.|.|:||||||:..|.:||.|:.:: |.||....:|:.::..|:.||.|:.||..|:|..:..|
Human   112 VAFTTKIYHPNINSNGSICLDILRSQ-WSPALTVSKVLLSICSLLCDPNPDDPLVPEIAHTYKAD 175

  Fly   133 RKKFVKNAEDYTKKHS 148
            |:|:.:.|.::|:|::
Human   176 REKYNRLAREWTQKYA 191

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ubc10NP_477414.1 UQ_con 6..144 CDD:395127 55/140 (39%)
UBE2D4XP_024302563.1 UBCc 54..191 CDD:320784 57/144 (40%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
10.910

Return to query results.
Submit another query.