DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ubc10 and ube2b

DIOPT Version :9

Sequence 1:NP_477414.1 Gene:Ubc10 / 37035 FlyBaseID:FBgn0026316 Length:154 Species:Drosophila melanogaster
Sequence 2:NP_001002747.1 Gene:ube2b / 437020 ZFINID:ZDB-GENE-040718-247 Length:152 Species:Danio rerio


Alignment Length:137 Identity:37/137 - (27%)
Similarity:74/137 - (54%) Gaps:3/137 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 APRRLRKELSDLQGNALKSFRDIKADDDNLLRWTGLIV-PDNPPYNKGAFRIEINFPAEYPFKPP 66
            |.|||.::...||.:.........: ::|::.|..:|. |...|:..|.|::.|.|..|||.|||
Zfish     5 ARRRLMRDFKRLQEDPPTGVSGAPS-ENNIMLWNAVIFGPVGTPFEDGTFKLVIEFSEEYPNKPP 68

  Fly    67 KINFKTRIYHPNIDEKGQVCLPIISTENWKPATRTDQVVQALVDLINDPEPEHPLRAELAEEFLK 131
            .:.|.::::|||:...|.:||.|:. ..|.|......::.::..|:::|.|..|..::.|:.:.:
Zfish    69 TVRFVSKMFHPNVYADGSICLDILQ-NRWSPTYDVSSILTSIQSLLDEPNPNSPANSQAAQLYQE 132

  Fly   132 DRKKFVK 138
            :::::.|
Zfish   133 NKREYEK 139

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ubc10NP_477414.1 UQ_con 6..144 CDD:395127 35/134 (26%)
ube2bNP_001002747.1 COG5078 1..151 CDD:227410 37/137 (27%)
UQ_con 8..145 CDD:278603 35/134 (26%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.910

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