DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ubc10 and ube2e3

DIOPT Version :9

Sequence 1:NP_477414.1 Gene:Ubc10 / 37035 FlyBaseID:FBgn0026316 Length:154 Species:Drosophila melanogaster
Sequence 2:NP_957215.2 Gene:ube2e3 / 321689 ZFINID:ZDB-GENE-030131-408 Length:209 Species:Danio rerio


Alignment Length:150 Identity:51/150 - (34%)
Similarity:88/150 - (58%) Gaps:7/150 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 TAPRRLRKELSDLQGNALKSFRDIKA--DDDNLLRWTGLIV-PDNPPYNKGAFRIEINFPAEYPF 63
            ::.:|::|||:::   .|....:..|  ..||:..|...|: |....|..|.|.::|.|.::|||
Zfish    63 SSAKRIQKELAEI---TLDPPPNCSAGPKGDNIYEWRSTILGPPGSVYEGGVFFLDITFSSDYPF 124

  Fly    64 KPPKINFKTRIYHPNIDEKGQVCLPIISTENWKPATRTDQVVQALVDLINDPEPEHPLRAELAEE 128
            ||||:.|:|||||.||:.:|.:||.|:. :||.||....:|:.::..|:.|..|..||...:|.:
Zfish   125 KPPKVTFRTRIYHCNINSQGVICLDILK-DNWSPALTISKVLLSICSLLTDCNPADPLVGSIATQ 188

  Fly   129 FLKDRKKFVKNAEDYTKKHS 148
            :|.:|.:..:.|..:||:::
Zfish   189 YLTNRAEHDRIARQWTKRYA 208

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ubc10NP_477414.1 UQ_con 6..144 CDD:395127 49/140 (35%)
ube2e3NP_957215.2 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.910

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