DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ubc10 and Ube2b

DIOPT Version :9

Sequence 1:NP_477414.1 Gene:Ubc10 / 37035 FlyBaseID:FBgn0026316 Length:154 Species:Drosophila melanogaster
Sequence 2:NP_001349614.1 Gene:Ube2b / 22210 MGIID:102944 Length:152 Species:Mus musculus


Alignment Length:149 Identity:37/149 - (24%)
Similarity:78/149 - (52%) Gaps:21/149 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MTAPRRLRKELSDLQGNALKSFRDIKAD----------DDNLLRWTGLIV-PDNPPYNKGAFRIE 54
            |:.|.|.|         .::.|:.::.|          ::|:::|..:|. |:..|:..|.|::.
Mouse     1 MSTPARRR---------LMRDFKRLQEDPPVGVSGAPSENNIMQWNAVIFGPEGTPFEDGTFKLV 56

  Fly    55 INFPAEYPFKPPKINFKTRIYHPNIDEKGQVCLPIISTENWKPATRTDQVVQALVDLINDPEPEH 119
            |.|..|||.|||.:.|.::::|||:...|.:||.|:. ..|.|......::.::..|:::|.|..
Mouse    57 IEFSEEYPNKPPTVRFLSKMFHPNVYADGSICLDILQ-NRWSPTYDVSSILTSIQSLLDEPNPNS 120

  Fly   120 PLRAELAEEFLKDRKKFVK 138
            |..::.|:.:.::::::.|
Mouse   121 PANSQAAQLYQENKREYEK 139

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ubc10NP_477414.1 UQ_con 6..144 CDD:395127 35/144 (24%)
Ube2bNP_001349614.1 UQ_con 8..145 CDD:395127 34/142 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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