DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ubc10 and ubc-1

DIOPT Version :9

Sequence 1:NP_477414.1 Gene:Ubc10 / 37035 FlyBaseID:FBgn0026316 Length:154 Species:Drosophila melanogaster
Sequence 2:NP_001379774.1 Gene:ubc-1 / 177170 WormBaseID:WBGene00006701 Length:192 Species:Caenorhabditis elegans


Alignment Length:157 Identity:40/157 - (25%)
Similarity:78/157 - (49%) Gaps:21/157 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MTAPRRLRKELSDLQGNALKSFRDIKAD----------DDNLLRWTGLIV-PDNPPYNKGAFRIE 54
            ||.|.|.|         .::.|:.::.|          :||:|.|..:|. |...|:..|.|::.
 Worm     1 MTTPSRRR---------LMRDFKKLQEDPPAGVSGAPTEDNILTWEAIIFGPQETPFEDGTFKLS 56

  Fly    55 INFPAEYPFKPPKINFKTRIYHPNIDEKGQVCLPIISTENWKPATRTDQVVQALVDLINDPEPEH 119
            :.|..|||.|||.:.|.::::|||:...|.:||.|:. ..|.|......::.::..|:::|.|..
 Worm    57 LEFTEEYPNKPPTVKFISKMFHPNVYADGSICLDILQ-NRWSPTYDVAAILTSIQSLLDEPNPNS 120

  Fly   120 PLRAELAEEFLKDRKKFVKNAEDYTKK 146
            |..:..|:.:.::|:::.|..:...::
 Worm   121 PANSLAAQLYQENRREYEKRVQQIVEQ 147

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ubc10NP_477414.1 UQ_con 6..144 CDD:395127 37/148 (25%)
ubc-1NP_001379774.1 UQ_con 8..145 CDD:395127 36/146 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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