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Protein Alignment Ubc10 and Ube2e1
DIOPT Version :9
Sequence 1: | NP_477414.1 |
Gene: | Ubc10 / 37035 |
FlyBaseID: | FBgn0026316 |
Length: | 154 |
Species: | Drosophila melanogaster |
Sequence 2: | XP_038949665.1 |
Gene: | Ube2e1 / 100366017 |
RGDID: | 2324438 |
Length: | 310 |
Species: | Rattus norvegicus |
Alignment Length: | 150 |
Identity: | 53/150 - (35%) |
Similarity: | 87/150 - (57%) |
Gaps: | 7/150 - (4%) |
- Green bases have known domain annotations that are detailed below.
Fly 2 TAPRRLRKELSDLQGNALKSFRDIKA--DDDNLLRWTGLIV-PDNPPYNKGAFRIEINFPAEYPF 63
|:.:|::|||:|: .|....:..| ..||:..|...|: |....|..|.|.::|.|..||||
Rat 164 TSAKRIQKELADI---TLDPPPNCSAGPKGDNIYEWRSTILGPPGSVYEGGVFFLDITFTPEYPF 225
Fly 64 KPPKINFKTRIYHPNIDEKGQVCLPIISTENWKPATRTDQVVQALVDLINDPEPEHPLRAELAEE 128
||||:.|:|||||.||:.:|.:||.|:. :||.||....:|:.::..|:.|..|..||...:|.:
Rat 226 KPPKVTFRTRIYHCNINSQGVICLDILK-DNWSPALTISKVLLSICSLLTDCNPADPLVGSIATQ 289
Fly 129 FLKDRKKFVKNAEDYTKKHS 148
::.:|.:..:.|..:||:::
Rat 290 YMTNRAEHDRMARQWTKRYA 309
|
Known Domains:
Indicated by green bases in alignment.
Gene | Sequence | Domain | Region |
External ID | Identity |
Ubc10 | NP_477414.1 |
UQ_con |
6..144 |
CDD:395127 |
50/140 (36%) |
Ube2e1 | XP_038949665.1 |
PHA03378 |
<19..>108 |
CDD:223065 |
|
UQ_con |
168..305 |
CDD:395127 |
50/140 (36%) |
Blue background indicates that the domain is not in
the aligned region.
|
Information from Original Tools:
Tool |
Simple Score |
Weighted Score |
Original Tool Information |
BLAST Result |
Score |
Score Type |
Cluster ID |
Compara |
0 | 0.000 |
Not matched by this tool. |
Domainoid |
0 | 0.000 |
Not matched by this tool. |
eggNOG |
0 | 0.000 |
Not matched by this tool. |
Hieranoid |
0 | 0.000 |
Not matched by this tool. |
Homologene |
0 | 0.000 |
Not matched by this tool. |
Inparanoid |
0 | 0.000 |
Not matched by this tool. |
OMA |
0 | 0.000 |
Not matched by this tool. |
OrthoDB |
0 | 0.000 |
Not matched by this tool. |
OrthoFinder |
0 | 0.000 |
Not matched by this tool. |
OrthoInspector |
0 | 0.000 |
Not matched by this tool. |
orthoMCL |
0 | 0.000 |
Not matched by this tool. |
Panther |
0 | 0.000 |
Not matched by this tool. |
Phylome |
1 |
0.910 |
- |
- |
|
|
SonicParanoid |
0 | 0.000 |
Not matched by this tool. |
SwiftOrtho |
1 |
1.000 |
- |
- |
|
|
TreeFam |
0 | 0.000 |
Not matched by this tool. |
|
2 | 1.910 |
|
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