DRSC/TRiP Functional Genomics Resources

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Protein Alignment aft and cmtr2

DIOPT Version :9

Sequence 1:NP_477413.1 Gene:aft / 37034 FlyBaseID:FBgn0026309 Length:700 Species:Drosophila melanogaster
Sequence 2:NP_998598.1 Gene:cmtr2 / 406742 ZFINID:ZDB-GENE-040426-2775 Length:743 Species:Danio rerio


Alignment Length:756 Identity:229/756 - (30%)
Similarity:329/756 - (43%) Gaps:130/756 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 RSSPQGKPHPMTDYQSIRPSEVEQLFEKKFHYQKPKGNKSWQLPPPDQALFSEFYQFEALQGLRE 68
            |::|:......|..:.|| :||.|||.|...|..|.|.| |.||.|:..|.........||.|:.
Zfish    10 RNAPEKASILETCDEEIR-AEVAQLFNKVRSYVPPAGEK-WTLPDPNVVLCDPHVSHPRLQALKH 72

  Fly    69 QLNAVKSKLNDYGVQEWSAHTNRRDPSGEVSWRLKNDTKAEFVTVAWCKLFECLHRYPLVTKPA- 132
            .||.||::|:|..:..|..||...:.:|.|:..|::.|.||..|.||.|.:|.|..:.|:...| 
Zfish    73 SLNEVKNQLSDKDLSVWHQHTCFTNRAGTVTSHLRSTTNAELCTQAWAKFYEILGTFQLLPDSAL 137

  Fly   133 ----VNSMHLCEAPGAFIASLNHYLHSKYEKDEIKWRWRSTTLNPYYEGNAINQMISDDRFIVHT 193
                :||:||||||||||::|||:|  |.......|.|.:.|||||||.|.....|:|||.||||
Zfish   138 KTGELNSIHLCEAPGAFISALNHFL--KTSSLHCDWNWIANTLNPYYEANGRGCTITDDRLIVHT 200

  Fly   194 LDNWFFHKDLTGNLLDVANIDHLVERCE-VEFQGQVDLVTADGSIDCAAQPDCQEEIVVRLFFAE 257
            |..|||..|.||   |:....||:|... |.....|||||||||.||...|..||.:|..|...|
Zfish   201 LPWWFFGSDNTG---DIMLQKHLLELPRFVSNMRSVDLVTADGSFDCQGDPGEQERLVAPLQHCE 262

  Fly   258 VLSALRILSSGGNFLVKMFTLFEACSVSLLYTLNCIFEEVHIFKPATSKRGNSEVYVICLNYNKD 322
            .:.||.:|.:||:|::|||||||..||.|||.|.|.|..|:||||.|||.||||:|::||:|...
Zfish   263 AICALLLLGTGGSFVLKMFTLFEHSSVCLLYLLACCFRSVNIFKPGTSKSGNSELYIVCLDYQAK 327

  Fly   323 HPDLPRLLEEIKSKLAQ---PNDTLVMPLFAKFQIPHDFLMQHEIACRMYMKLQTDAIEGSIYAY 384
            ....|.|     |||.:   |:......||.:..||..||.|||..|..:..||.:.|:.::..:
Zfish   328 EQIRPLL-----SKLIRNYGPDLASTASLFPRRCIPDSFLSQHEEICTFFQALQVNTIQENLRLF 387

  Fly   385 ESNDRHYLRHLHHLRSLVANTYYSLYKVK--PLEDSLC--------------------------- 420
            ........|.|..||...|..|...:.|:  |.:..:|                           
Zfish   388 VCMSTEQRRRLEQLREYAAEFYTKRFSVQYLPRKSWVCRGGVVRWVKVCERKQMGSLNQRKEMEL 452

  Fly   421 --------------IVDKEATSKALGFQVPVYG-------GSYTERESLKHGDLLKQIYCLRREF 464
                          .::|...: |.|.:|.:.|       |::...|......:...|:|.:...
Zfish   453 QGWKQRLAQGNYGPFIEKHLVA-AEGCEVVLNGPLDECDLGAWFALEGAALPKVCSSIFCDQEML 516

  Fly   465 NQLEKCL--NNRTPYSYVKNRTAPLNLHISRGAPVQSLQSSMFASEP----ILILRLRI-----L 518
            :.|.:.|  |.|........:..|.....|..:||..|  |...|.|    .|:|..:.     |
Zfish   517 DFLNEALEGNLRVKTVNWSLKALPTCSSCSSDSPVSIL--SEICSHPDVTSCLVLGSQSWCDDKL 579

  Fly   519 DTFELDPVWQSAPK-CQLESKTLCYLPPTEDEAFHTAQQRFFIDLLEEV-----KKLKPDSIVFH 577
            ....:.|.:...|. |.:::.|:           |..|..:.::||..|     |:.:..::|..
Zfish   580 TGVRIQPEFLQGPSYCGVQNVTM-----------HDGQPDYQLELLNAVLFALQKQDQGSTLVIP 633

  Fly   578 KFLFLTHYAASLLLFLIESVYQDCCFNSNQAQTLT-----------------LSKLKDTANSALE 625
            ....||.:.:.|:..|      ..||.....:.|:                 |..|.|    .|:
Zfish   634 LSSALTRFTSGLVFTL------HLCFRYITFRCLSGWPPAALVCMGFSPPSALPSLLD----FLQ 688

  Fly   626 QVLELLKDEQAG-AIHSLLDIKELQKNQFSKALIQHNNSIV 665
            .|:|.:|..:.| .:...:.::||.:.:....|...|.:::
Zfish   689 NVMEKMKKVELGRQVLQFVPLEELLRGELPHFLSSFNTAVI 729

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
aftNP_477413.1 FtsJ 110..319 CDD:279986 108/214 (50%)
cmtr2NP_998598.1 FtsJ 118..324 CDD:279986 107/210 (51%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170593962
Domainoid 1 1.000 200 1.000 Domainoid score I3002
eggNOG 1 0.900 - - E1_KOG3674
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 282 1.000 Inparanoid score I2867
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1327262at2759
OrthoFinder 1 1.000 - - FOG0007380
OrthoInspector 1 1.000 - - oto38873
orthoMCL 1 0.900 - - OOG6_105981
Panther 1 1.100 - - LDO PTHR16121
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X5504
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
ZFIN 00.000 Not matched by this tool.
1312.760

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