DRSC/TRiP Functional Genomics Resources

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Protein Alignment aft and Cmtr2

DIOPT Version :9

Sequence 1:NP_477413.1 Gene:aft / 37034 FlyBaseID:FBgn0026309 Length:700 Species:Drosophila melanogaster
Sequence 2:NP_666327.2 Gene:Cmtr2 / 234728 MGIID:2384580 Length:767 Species:Mus musculus


Alignment Length:776 Identity:238/776 - (30%)
Similarity:350/776 - (45%) Gaps:145/776 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 RSSPQGKPHPMTDYQSIRPSEVEQLFEKKFHYQKPKGNKSWQLPPPDQALFSEFYQFEALQGLRE 68
            |..|..:|..:..:.....::|.:||.|.|.|:||..|: ||||.|.::......:|.||..|:.
Mouse     5 RKLPARQPACLETFSPDVLNDVSELFAKSFSYRKPLDNE-WQLPAPTESFSCGHLEFRALLDLKN 68

  Fly    69 QLNAVKSKLNDYGVQEWSAHTNRRDPSGEVSWRLKNDTKAEFVTVAWCKLFECLHRYPLVTKPA- 132
            .||.||:.|:|..:.||..||...:.:|::...:|....||..|.||||..|.|..:||:.:.| 
Mouse    69 SLNEVKNLLSDKKLDEWHRHTAFTNKAGKIISHVKKAVNAELCTQAWCKFQEILCSFPLIPQEAF 133

  Fly   133 ----VNSMHLCEAPGAFIASLNHYLHSKYEKDEIKWRWRSTTLNPYYEGNAINQMISDDRFIVHT 193
                :||:|||||||||||||||||  |..:...:|.|.:.:||||:|.|...:||:|||.:.:|
Mouse   134 QSGRLNSLHLCEAPGAFIASLNHYL--KSHRFPCEWSWVANSLNPYHEANDNLRMITDDRLMANT 196

  Fly   194 LDNWFFHKDLTGNLLDVANIDHLVERCEVEFQGQVDLVTADGSIDCAAQPDCQEEIVVRLFFAEV 258
            |..|:|..|.||:::.:..:..|.:  .:.....:.|||||||.||...|..||.:|..|.:.|.
Mouse   197 LHCWYFGPDNTGDIMTLKYLTGLQD--FLSGMSPIHLVTADGSFDCQGNPGEQEALVSSLHYCEA 259

  Fly   259 LSALRILSSGGNFLVKMFTLFEACSVSLLYTLNCIFEEVHIFKPATSKRGNSEVYVICLNY---N 320
            ::||..|..||:|::|||||||.|||:|:|.|||.|::||:|||||||.|||||||:||.|   .
Mouse   260 VTALITLGDGGSFVLKMFTLFEHCSVNLMYLLNCSFDQVHVFKPATSKAGNSEVYVVCLRYKGRE 324

  Fly   321 KDHPDLPRLLEEIKSKLAQPNDTLVMPLFAKFQIPHDFLMQHEIACRMYMKLQTDAIEGSIYAYE 385
            ...|.|.|::....:::.:      ..||....||..||.:||..|..:.:.|.:.|..:|..:|
Mouse   325 AVQPLLSRMVLNFGTEMTR------KALFPHHVIPKSFLERHEECCTFFHRYQLETISENIRLFE 383

  Fly   386 SNDRHYLRHLHHLRSLVANTYYSLYKVKPLEDSLCIVDK-----EATSKALGFQVPVYGGSYTER 445
            |........|::||......:...:::|||..:..:|.|     ...:|..| |...|..:|.||
Mouse   384 SMGTGEQERLNNLRDCAVQYFMQKFQLKPLSRNHWLVKKSNIGCSMNTKWFG-QRNKYFKTYNER 447

  Fly   446 ESLK----------------------------------------------HGDLLKQIYCLRREF 464
            :.::                                              .|..|.::.|.....
Mouse   448 KMMETLSWKDKVAKGYFNSWAEEHTVYHPGQNSLLEGTASSLEYQSWQVLEGKKLPKVKCSPFCD 512

  Fly   465 NQLEKCLNNRTPYSYVKNRTAPLNLHISRGAPVQSLQS----SMFASEPIL--ILRLR--ILDTF 521
            .::.|.||.....|        |...:|..|.|.|.|.    .:|:.|.:|  :|||.  :.|..
Mouse   513 GEILKTLNEAIEKS--------LGEALSVDAKVSSKQQYRCCPVFSEESVLSELLRLTKCLPDEQ 569

  Fly   522 ELDPVWQSAP-KCQL-ESKTLCYL---PPTEDEAFHT----------------AQQRFFID-LLE 564
            ..:|   |.| ||.| .|..:|.|   .|.|.:...:                |.|..|:| ||.
Mouse   570 GAEP---SGPVKCLLVGSPAVCDLQMPAPLEIQLVESVELTAFSCSLLHDGDPAYQHLFLDCLLH 631

  Fly   565 EVKKLKPDSIV-------FHKFL----FLTHYAASLLLF--------------LIESVYQ---DC 601
            .:::|....::       |.:|:    |:.|.....:.|              |:...||   |.
Mouse   632 SLRRLHRGDVMVLPILSCFTRFMAGLTFVLHGCFRFITFSCPTSLEPLRTCAVLLCIGYQNLPDA 696

  Fly   602 CFNSNQAQTLTLSKLKDTANSALEQVLELLKDE---QAGAIHSLLDIKELQKNQFSKALIQ 659
            .|...|.....||||...  ||..|:|:.|..|   |...:..|.|:......:....:||
Mouse   697 VFQFLQNVHDLLSKLLHP--SAPRQILQFLPMEALLQGTLLDFLWDLNAAIAKRHLHLIIQ 755

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
aftNP_477413.1 FtsJ 110..319 CDD:279986 106/213 (50%)
Cmtr2NP_666327.2 FtsJ 114..320 CDD:376603 105/209 (50%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167848473
Domainoid 1 1.000 212 1.000 Domainoid score I2778
eggNOG 1 0.900 - - E1_KOG3674
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 299 1.000 Inparanoid score I2687
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0007380
OrthoInspector 1 1.000 - - oto92137
orthoMCL 1 0.900 - - OOG6_105981
Panther 1 1.100 - - LDO PTHR16121
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X5504
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
1211.750

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