DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment aft and Y40D12A.1

DIOPT Version :9

Sequence 1:NP_477413.1 Gene:aft / 37034 FlyBaseID:FBgn0026309 Length:700 Species:Drosophila melanogaster
Sequence 2:NP_498461.3 Gene:Y40D12A.1 / 182563 WormBaseID:WBGene00021502 Length:635 Species:Caenorhabditis elegans


Alignment Length:613 Identity:130/613 - (21%)
Similarity:232/613 - (37%) Gaps:196/613 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly    79 DYGVQEWSAHTNRRDPSGEVSWRLKN--------DTKAEFVT----------------VAWCKLF 119
            ||   |:|..|||...:.....::|:        |...:|..                :..|::|
 Worm    48 DY---EFSKQTNRLTQAAMEIRKIKDKDLYDQHTDMMHDFARNPRILQNYFICKNKAFLKLCEIF 109

  Fly   120 ECLHRYPLVTKPAVNSMHLCEAPGAFIASLN-HYLHSKYEKDEIK-WRWRSTTLNPYYEGNAINQ 182
            | :.::.:....:::|.||||.||.||.::: ..:.|:.:.:|:. |:|.:.|||||:|..:...
 Worm   110 E-VFKFDIFEGSSISSFHLCEGPGYFIEAVHVALMRSRGKNEEMSYWKWGANTLNPYFENRSCFD 173

  Fly   183 MISDDRFIVHTLDNWFFHKDLTGNLLDVANIDHLVERCEVEFQGQVDLVTADGSIDCAAQPDCQE 247
            .:.||..|..|:|.|:|.....|: ::....::|:::   :..|..||||||||.:...:....|
 Worm   174 KLIDDSHIRPTMDQWYFGPSDDGD-IEKFTEEYLIKQ---KLAGTFDLVTADGSTNTQGKEGEIE 234

  Fly   248 EIVVRLFFAEVLSALRILSSGGNFLVKMFTLFEACSVSLLYTLNCI---FEEVHIFKPATSKRGN 309
            .||..|..|||..||::|...|..::|.:..   |:.|....:|.:   |..:...||..|:.|:
 Worm   235 SIVSSLISAEVEVALKLLRRNGRLILKTYRF---CAKSTRDVMNLLADNFSSIKAIKPMASRPGS 296

  Fly   310 SEVYVICLNYNKDHPDLPRLLEEIKSKLAQPNDTLVMPLFAKFQIPHDFLMQHEIACRMYMKLQT 374
            ||.|::|..:...                                     |..:|:    |.||.
 Worm   297 SERYIVCDGFGGS-------------------------------------MNMDIS----MLLQC 320

  Fly   375 DAIEGSIYAYESNDR---HYLRHLHHLRSLVANTYYSLYKVKPLEDSLCIVDKEATSKALGFQVP 436
            |    ..:.|:..||   |....:.|.|..:.:.:.|..|.        :.||..|:::      
 Worm   321 D----EFFVYKQIDRIELHLKTFIEHHRMYLKDNWNSFLKT--------MKDKSFTAES------ 367

  Fly   437 VYGGSYTERESLKHGDLLKQIYCLRREFNQLEKCLNNRTPYSYVK-------NRTAPLNLHIS-- 492
                               :.:|  ||...:....::|:...:::       .|..|.:|.||  
 Worm   368 -------------------RYFC--RELQSMFPSGSSRSSSPWMRLYGHNLIRRNNPEDLKISIN 411

  Fly   493 -------------RGAPVQSLQSSMFASEPILI---LRLRILDTFELDPVWQSAPKCQLESKTLC 541
                         :...|:.:.:.:...|.||.   ::||.:|:..:||:   |.|..|...:  
 Worm   412 RYILTADIFDPDYQKLDVEQIVARIMDQEEILTTSDIQLRTIDSLFVDPI---ALKQMLSHNS-- 471

  Fly   542 YLPPTEDEAFHTAQQRFFIDLLEEVK-KLKPDSIVFHKFLFLTHYAASLLLFLIESVYQDCCFNS 605
                           :.:.||.|:|. |...|...:.|     :::                 ||
 Worm   472 ---------------KIYYDLFEKVSTKNSADECDWRK-----NFS-----------------NS 499

  Fly   606 NQAQTLTLSKLKDTANSALEQVLELLKD 633
            |:..||.|    || |..:|.:|..:.:
 Worm   500 NRNYTLKL----DT-NVTIEHILAAISE 522

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
aftNP_477413.1 FtsJ 110..319 CDD:279986 65/229 (28%)
Y40D12A.1NP_498461.3 FtsJ 97..306 CDD:376603 64/216 (30%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C160165901
Domainoid 1 1.000 107 1.000 Domainoid score I4093
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1327262at2759
OrthoFinder 1 1.000 - - FOG0007380
OrthoInspector 1 1.000 - - oto18218
orthoMCL 1 0.900 - - OOG6_105981
Panther 1 1.100 - - LDO PTHR16121
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X5504
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
98.850

Return to query results.
Submit another query.