DRSC/TRiP Functional Genomics Resources

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Protein Alignment aft and cmtr2

DIOPT Version :9

Sequence 1:NP_477413.1 Gene:aft / 37034 FlyBaseID:FBgn0026309 Length:700 Species:Drosophila melanogaster
Sequence 2:XP_004914385.2 Gene:cmtr2 / 100496665 XenbaseID:XB-GENE-6035233 Length:729 Species:Xenopus tropicalis


Alignment Length:723 Identity:223/723 - (30%)
Similarity:323/723 - (44%) Gaps:146/723 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    22 PSEVEQLFEKKFHYQKPKGNKSWQLPPPDQALFSEFYQFEALQGLREQLNAVKSKLNDYGVQEWS 86
            |:|:|.||.|:|.|:|   ...|.||...:...||..:......|::.||..|:.|:|..:.:|.
 Frog     7 PAEIECLFSKQFQYKK---TSEWHLPGASEIFSSEHEELSNFISLKDSLNKTKNLLSDKKLNDWH 68

  Fly    87 AHTNRRDPSGEVSWRLKNDTKAEFVTVAWCKLFECLHRYPLVTKPAV-----NSMHLCEAPGAFI 146
            .||...:.:|.|...::....||..|.||||..|...:|||:...||     |::||||||||||
 Frog    69 QHTAFTNLAGRVVPEVRRLANAELCTQAWCKFHEIAWKYPLLPTNAVWNSELNTVHLCEAPGAFI 133

  Fly   147 ASLNHYLHSKYEKDEIKWRWRSTTLNPYYEGNAINQMISDDRFIVHTLDNWFFHKDLTGNLLDVA 211
            |||||||  |.:.|...|.|.:.|||||:|.|....||:|||||.:||..|:|..|.||:::.:.
 Frog   134 ASLNHYL--KTQDDCCDWNWVANTLNPYHEANDGLVMIADDRFIANTLPWWYFGPDNTGDIMTIK 196

  Fly   212 NIDHLVERCEVEFQGQVDLVTADGSIDCAAQPDCQEEIVVRLFFAEVLSALRILSSGGNFLVKMF 276
            .::.|.:  .:.....|.|||||||.||...|..||.:|..|.:.||::.|..||.||:|::|||
 Frog   197 YLNGLQQ--FISNMSAVHLVTADGSFDCQGDPGEQESLVSPLHYCEVVTCLLTLSKGGSFVLKMF 259

  Fly   277 TLFEACSVSLLYTLNCIFEEVHIFKPATSKRGNSEVYVICLNY-NKDHPDLPRLLEEIKSKLAQP 340
            |||:..|::|:|.|||.|.||||.||.|||.|||||||:||:| .|:      ::::|:.||...
 Frog   260 TLFQHSSINLMYLLNCCFSEVHIIKPGTSKAGNSEVYVVCLDYFGKE------VIQDIQPKLIHN 318

  Fly   341 NDT--LVMPLFAKFQIPHDFLMQHEIACRMYMKLQTDAIEGSIYAYESNDRHYLRHLHHLRSLVA 403
            ..|  ....||.:..:|..||..|...|..:.|.||:.|..::..:........:.|..||.|..
 Frog   319 FGTGMASKSLFPQRCLPESFLSCHLECCTFFYKHQTETIIENLQLFSDMGEDQKKRLATLRDLAV 383

  Fly   404 NTYYSLYKVKPLEDSLCIVDKEATSKALGFQVPVYGG-------SYTERESLK------------ 449
            :.|..:..::.::....:|.......:|.   |.:.|       :|.||:.|:            
 Frog   384 SYYRRMCNLRRIQRKQWLVKNPRAGCSLN---PRWVGIRNRRTDTYNERKKLEALTWTEKVAQGY 445

  Fly   450 ----------------------------------HGDLLKQI----YCLRREFNQLEKCLNNRTP 476
                                              .|:||.:|    :|    .|.|.|.| |.|.
 Frog   446 FNPWLKDHVQSDMSAGSSLECQYYDLKLNDWYFLKGNLLPRIQSSPFC----ENDLLKAL-NETI 505

  Fly   477 YSYVKNRTAPLNLHISRGAPVQSLQSSMFAS---------EPILILRLRILDTF----------- 521
            ..:.|.....|.|.|.......::.|  |||         :.|||.....|.||           
 Frog   506 AEFFKGTINILALPICSSCYALNIDS--FASIVLSMIDGDQHILICGTHSLYTFLNERHRCCSFL 568

  Fly   522 -------------ELDPVWQSAPKCQLESKTLCYLPPTEDEA-----FHTAQQRFFIDLLEEVKK 568
                         :.:||    .:.||.:..:|.|...|...     ..:...||...:|     
 Frog   569 ETPISYKSISLLHDGEPV----NELQLITLVVCALQRLEMGGSLVLPILSCFTRFTAGIL----- 624

  Fly   569 LKPDSIVFHKFLFLTHYAASLLLFL-IESVYQDCCFNSNQAQTL-TLSKLKDTANSAL-----EQ 626
                .:::|.|.|:|....:..|.. .::|...|.|||..:|.| .|.|||:..:|.:     :|
 Frog   625 ----YVLYHCFQFITFLCPTASLTPGTDTVLLCCGFNSVPSQVLQQLEKLKELLDSLVGSGSHQQ 685

  Fly   627 VLELLKDE 634
            |||.:..|
 Frog   686 VLEFVPME 693

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
aftNP_477413.1 FtsJ 110..319 CDD:279986 109/213 (51%)
cmtr2XP_004914385.2 FtsJ 96..302 CDD:396336 108/209 (52%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 213 1.000 Domainoid score I2710
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1327262at2759
OrthoFinder 1 1.000 - - FOG0007380
OrthoInspector 1 1.000 - - oto102447
Panther 1 1.100 - - LDO PTHR16121
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X5504
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
88.020

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