DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment fab1 and FAB1

DIOPT Version :9

Sequence 1:NP_611269.1 Gene:fab1 / 37033 FlyBaseID:FBgn0028741 Length:1809 Species:Drosophila melanogaster
Sequence 2:NP_116674.2 Gene:FAB1 / 850574 SGDID:S000001915 Length:2278 Species:Saccharomyces cerevisiae


Alignment Length:2446 Identity:533/2446 - (21%)
Similarity:867/2446 - (35%) Gaps:869/2446 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly    50 SYNTVNDISSGSSSSSSTQPVQV-------VGKSQFFSDSQTSTAEIADVET----SSQSSVRPQ 103
            |:...:.:.|.|:.:||...:..       :.|......|.::|:...|:.|    |:.|..:..
Yeast    11 SFPDGSHVRSSSTGTSSVNTIDATLSRPNYIKKPSLHIMSTSTTSTTTDLVTNPILSNISVPKIS 75

  Fly   104 PPTTLSIRT---NSETRGTSTSSNTAAE-DSETSDRVETLPLPTSEANQGRTVSNVLKHI----- 159
            |||:.||.|   .|...||::.||..|. ::.||...:.||..||    ||..|:.:|..     
Yeast    76 PPTSSSIATATSTSHVTGTASHSNIKANANTSTSVNKKNLPPTTS----GRIPSSTIKRYPSRYK 136

  Fly   160 -----------------SNIVATKNN---NDLRNYKDTELQ------------------------ 180
                             |:|.|:|:.   ..:||.:...:|                        
Yeast   137 PSHSLQLPIKNDSNFKRSSIYASKSTVTAIPIRNNRPISMQNSYARTPDSDHDDVGDEVSSIKSA 201

  Fly   181 ---------------------------------RFWMPDSKAKECYDCSQKFSTFRRKHHCRLCG 212
                                             .:||.|..:|||:.|.:.|:|||||||||:||
Yeast   202 SSSLTASLSKSFLFAFYNNRKKDKTSNNGVLSKEYWMKDESSKECFSCGKTFNTFRRKHHCRICG 266

  Fly   213 QIFCSKCCNQVVPGMIIRCDGDLKVCNYCSKIVLTFLKSSSSEMGQDMQ---------------- 261
            |||||. |..::.|....|...::||..|.:...|:..||..|....||                
Yeast   267 QIFCSS-CTLLIDGDRFGCHAKMRVCYNCYEHADTYEDSSDEENDSTMQLNEPRSRSRSRSSNTN 330

  Fly   262 ---ELQQHLSNKLEVQDSGSSL------AKHPQMQR--------------------------APL 291
               ....||....:...:|:.|      ..:||.|.                          .|.
Yeast   331 PYSHSHSHLHLISQDNHNGTDLHDPVAATDNPQQQNEVYLLNDDDVQSIMTSGEDSKLFISTPPP 395

  Fly   292 PRKTSV---------------------GYQEERFSSH------PT-YTTLSIDDRKNILQQSNSL 328
            |.|.::                     .||::....|      || ||...:|:..:....|||.
Yeast   396 PPKMAIPATKQGGSLEISFDSENDRALHYQDDNPGRHHHLDSVPTRYTIRDMDNISHYDTNSNST 460

  Fly   329 ITLHEEMQRDL---------------------------PAQNCGQRLIEFLNSN--NKSANEVQA 364
            :..|.......                           ||.:..:.:..:::||  ||.:|...|
Yeast   461 LRPHYNTNNSTITINNLNNTTSNNSNYNNTNSNSNINNPAHSLRRSIFHYVSSNSVNKDSNNSSA 525

  Fly   365 VAILNAMLAAGFLEP---IVPD----------------PEQMDFDSS------------------ 392
            ....:|. ::..|:|   |:.:                |.|.:..::                  
Yeast   526 TPASSAQ-SSSILDPANRIIGNYAHRNYKFKFNYNSKGPSQQNDTANGNNDNNNNNNNNNNNNNN 589

  Fly   393 ----------------------------------------LHYKFSKSSSSDTSRTMSPQFEAN- 416
                                                    |.|..::..||:...:||.....| 
Yeast   590 NSASGIADNNNIPSNDNGTTFTLDKKKRNPLTKSKSTSAYLEYPLNEEDSSEDEGSMSIYSVLND 654

  Fly   417 PHAEPQPPKSMDQSA-----------------EEKEKELENELEN-------------------- 444
            .|....|.:||..|.                 :.|.|...|..::                    
Yeast   655 DHKTDNPIRSMRNSTKSFQRAQASLQRMRFRRKSKSKHFPNNSKSSIYRDLNFLTNSTPNLLSVV 719

  Fly   445 -------------DRCYTTATSKL----------------------------LASYCE------- 461
                         |:..::|.|:|                            :||...       
Yeast   720 SDDNLYDDSSPLQDKASSSAASRLTDRKFSNSSGSNNNSNSNSNINTDPWKRIASISGFKLKKEK 784

  Fly   462 ----------HEEQLLAQMLRAHNLD--QEW----DKVLQMLCSTAANHFKPEHCSNDL--MDIR 508
                      |...||.|:|....:.  |||    |..|:.:..|..|       :.||  :|.|
Yeast   785 KRELNEVSLLHMHALLKQLLNDQEISNLQEWITLLDGALRKVLRTILN-------ARDLNTLDFR 842

  Fly   509 -NYVNFKKVPGGRRKDSKIVHGVAFSKNVAHKDMATHVPFPRILLLQCPIVYERIEGKFVTIETV 572
             .||..|::.||..::|:.:.||.|||.:..|.|..|:..|||||:..|:.|::....|::||:|
Yeast   843 QTYVKIKRISGGSPQNSEYIDGVVFSKALPSKTMPRHLKNPRILLIMFPLEYQKNNNHFLSIESV 907

  Fly   573 LLQEKEYLRNVCARIMSFKPNVVLVHKNVAGIAQDLLRSYEVTLVLDVKLSVMERLSRTLQCDIV 637
            ..||:|||..:.:|:.|..|:::.|..||:|.|.:||....:.:..::|..|:||:::..:.||.
Yeast   908 FRQEREYLDKLVSRLKSLHPDIIYVGANVSGYALELLNDSGIVVQFNMKPQVIERIAKLTEADIA 972

  Fly   638 SSIESNITMPKLGYCNDFYIRNY----NGKTLMFFEKLTNPRGYTCLLRGGSNAELTRVKRVASA 698
            .|::...|..|:|.|..|.:::|    ..||..|........|.|.||||.|...|.::|:|:..
Yeast   973 ISVDKLATNIKMGECETFEVKSYIYGNISKTYTFLRGCNPELGGTILLRGDSLENLRKIKQVSEF 1037

  Fly   699 LLFARYNWRLEMSFLLNEFAQPLSPKPSIFDSKETSPKTETEAELRSKRPIILERKSEDKITTIV 763
            :::|.::.:||.||..:.|.|                 ..|:..|         :::|.|...:.
Yeast  1038 MVYAIFSLKLESSFFNDNFIQ-----------------LSTDVYL---------KRAESKKLQVF 1076

  Fly   764 SENVSDFTDPLRASQAEALSTSPCAPPVVEALAVEPRYDNRFRTALSSTLLSVSPFLTFPLPY-L 827
            ....:||.                           .:::||        :|:|||.:.||:|: |
Yeast  1077 EGYFADFL---------------------------IKFNNR--------ILTVSPTVDFPIPFLL 1106

  Fly   828 ETEQGRKCKLRKLFPAELYFSKQWSRTGLERPDSMGDGEAGKSEPG-NKENQMQLLPAHDFVLMK 891
            |..:|.:.||                  :||.:..      :||.. :::.|:.:|...:..:.|
Yeast  1107 EKARGLEKKL------------------IERINQY------ESESDLDRQTQLNMLQGLESTITK 1147

  Fly   892 -----ITAPASSRDIQSKLAEFRSFGGRLPKGKAPMLRPKKKNAEVIQRPQKVSEEQLYKDALDP 951
                 :.......:|::...||:.               :.:..||     ..|..|   :.|..
Yeast  1148 KHLGNLIKFLHEMEIENLELEFQK---------------RSRQWEV-----SYSSSQ---NLLGT 1189

  Fly   952 QNHQRLPVLFCSFHYNPKGVSSFCKLPMLLDMKFYGQYDIMLEQFLQ------RYCCLFNSMCPS 1010
            .:||.:.||:......   .::.|..|.::.:.::...||.:.||::      ||.|.     ..
Yeast  1190 GSHQSITVLYSMVSTK---TATPCVGPQIVTIDYFWDSDISIGQFIENVVGTARYPCQ-----QG 1246

  Fly  1011 CNLPMLGHVRRYVHSLGCVHVYLTEDLTRSDPTRIYFTSW--CSICNATTPTIPLSDAAKCLSLA 1073
            ||...|.|.|.|||..|.|.|.:.:..||....:....:|  |..|..:||.:.:|:.....|..
Yeast  1247 CNGLYLDHYRSYVHGSGKVDVLIEKFQTRLPKLKDIILTWSYCKKCGTSTPILQISEKTWNHSFG 1311

  Fly  1074 KYLEMRFHGHAYKRRPPSTDAEQGGTVCEHSLHRDYVHHFSFRGVGAKFQYTPVEV--------- 1129
            ||||:.|  .:||      |:..|...|.|...:|:|.:|.:..:..:.:|:.:||         
Yeast  1312 KYLEVMF--WSYK------DSVTGIGKCPHDFTKDHVKYFGYNDLVVRLEYSDLEVHELITPPRK 1368

  Fly  1130 --WETDLPSLTVQLDLPQPFQSAQVQEEIKNFSIKGHEVYNRIHERIADLATEEE---NSPLVQH 1189
              |:   |.:.::|.:...:   ::.|:|.||.   ..|.:|:.....|..|:::   ....:..
Yeast  1369 IKWK---PHIDIKLKVELYY---KILEKINNFY---GSVLSRLERIKLDSMTKDKVLSGQAKIIE 1424

  Fly  1190 LKTMLTHDQFIFKQKIEIVHTLLTDNRATAYDTSDALAMARRALAESIELWG-----------PR 1243
            ||:..|.:|.:..|.::   |...|:..   |....|.:..::|.:....|.           |.
Yeast  1425 LKSNATEEQKLMLQDLD---TFYADSPC---DQHLPLNLVIKSLYDKAVNWNSTFAIFAKSYLPS 1483

  Fly  1244 LQEIEKLTAKQAHHI--DSGTICTEELRPEQVQTADSSKVTTSSLPKEN-DPLECPSEDTETGAS 1305
            ..:|.::||||...:  ||....:|:.:....:.|.:.|...:.||.|. ..:|.|..|::....
Yeast  1484 ETDISRITAKQLKKLFYDSSRKDSEDKKSLHDEKAKTRKPEKNELPLEGLKDVEKPKIDSKNTTE 1548

  Fly  1306 NSQTVLDKNFSIDQMLASTVNVYSDKKSI-----RKILTQLLPSGNQVNPLQSPFPAQ------- 1358
            |      ::.:.:...|.|:..:.|...|     ...|| :.||.:.|:...:|...:       
Yeast  1549 N------RDRTNEPQNAVTITTFKDDTPIIPTSGTSHLT-VTPSASSVSSSLTPQTEERPPISRS 1606

  Fly  1359 --------DHLTLP-------------LGSIPIHVRETDLSSVIAYSLTSMDYQKAIDEAEAN-- 1400
                    |..|.|             |.|:.....:.:..|.:|.....|.:.....|.|..  
Yeast  1607 GTGISMTHDKSTRPNIRKMSSDSSLCGLASLANEYSKNNKVSKLATFFDQMHFDALSKEFELERE 1671

  Fly  1401 ------SNAAHSSPQLKRKIPLAE---SVSDAEDSPSLSRTSSNTSAAPNASV------------ 1444
                  :...:.:.:|:...|:.|   :|.||.|.|..||:|.|..::.|...            
Yeast  1672 RERLQLNKDKYQAIRLQTSTPIVEIYKNVKDAVDEPLHSRSSGNNLSSANVKTLEAPVGEHSRAN 1736

  Fly  1445 ----------------------------PSPATAAS---ESEEKSKERIKQPPSPHITLAFQDHS 1478
                                        ||..|.||   .|:...||..:.|.|           
Yeast  1737 NCNPPNLDQNLETELENSISQWGENILNPSGKTTASTHLNSKPVVKETSENPKS----------- 1790

  Fly  1479 CQFQCKIYFAREFDAMRSKSLKP-------------PKLDKSL---------------------- 1508
                    ..||.|..:|:.|.|             |:.:|||                      
Yeast  1791 --------IVRESDNSKSEPLPPVITTTTVNKVESTPQPEKSLLMKTLSNFWADRSAYLWKPLVY 1847

  Fly  1509 ---------------------------------YR------RLEKSKMREELRISQSRTG----- 1529
                                             ||      .:::.:.::....:.::||     
Yeast  1848 PTCPSEHIFTDSDVIIREDEPSSLIAFCLSTSDYRNKMMNLNVQQQQQQQTAEAAPAKTGGNSGG 1912

  Fly  1530 -------------------------SEME--------LVRKPSDVGAPRTTEDDSNQEEDARI-- 1559
                                     ||:.        |:..|...||...|..:|.....|.:  
Yeast  1913 TTQTGDPSVNISPSVSTTSHNKGRDSEISSLVTTKEGLLNTPPIEGARDRTPQESQTHSQANLDT 1977

  Fly  1560 ------------------------------------------------ALARSLCKSVQWEARGG 1576
                                                            ...:||.:.|:|::.||
Yeast  1978 LQELEKIMTKKTATHLRYQFEEGLTVMSCKIFFTEHFDVFRKICDCQENFIQSLSRCVKWDSNGG 2042

  Fly  1577 KSGSRFCKTLDDRFVLKEMNSRDMTIFEPFAPKYFEYIDRCQQQQQPTLLAKIFGVFRVSVKKKD 1641
            ||||.|.|||||||::||::..::..|..|||.||||:.:......||.|||:||.:::.||...
Yeast  2043 KSGSGFLKTLDDRFIIKELSHAELEAFIKFAPSYFEYMAQAMFHDLPTTLAKVFGFYQIQVKSSI 2107

  Fly  1642 S---FVERSVMVMENLFYGCNIENKFDLKGSERNRLVDPSNQQGEIVLLDENLVQMSWSKPLYVL 1703
            |   ..:..|::||||||.......||||||.|||.|:.:.:..| ||||||:|:..:..|::|.
Yeast  2108 SSSKSYKMDVIIMENLFYEKKTTRIFDLKGSMRNRHVEQTGKANE-VLLDENMVEYIYESPIHVR 2171

  Fly  1704 SHSKTVLRDAIQRDSSFLEKNLVMDYSLLVGLDKKNGVLVLGIIDYIRTFTLDKRVESIIKGSGI 1768
            .:.|.:||.::..|:.||.|..||||||::|:|.:...|.:||||:|||||.||::||.:|..|:
Yeast  2172 EYDKKLLRASVWNDTLFLAKMNVMDYSLVIGIDNEGYTLTVGIIDFIRTFTWDKKLESWVKEKGL 2236

  Fly  1769 LGGKG--KDPTVVNPERYKQRFIDAMDRYFLTVPDRW--EG 1805
            :||..  |.||||.|.:||:||.:||:||.|.|||.|  ||
Yeast  2237 VGGASVIKQPTVVTPRQYKKRFREAMERYILMVPDPWYREG 2277

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
fab1NP_611269.1 FYVE_PIKfyve_Fab1 182..243 CDD:277264 30/60 (50%)
DEP 329..397 CDD:214489 17/173 (10%)
Fab1_TCP 464..717 CDD:239450 86/265 (32%)
PIPKc 1413..1797 CDD:295374 157/596 (26%)
FAB1NP_116674.2 PHA03255 <64..>145 CDD:165513 24/84 (29%)
FYVE_like_SF 236..296 CDD:333710 30/60 (50%)
Fab1_TCP 797..1056 CDD:239450 86/265 (32%)
MSS4 1597..2278 CDD:227578 175/701 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C157343099
Domainoid 1 1.000 145 1.000 Domainoid score I985
eggNOG 1 0.900 - - E1_COG5253
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 541 1.000 Inparanoid score I175
Isobase 1 0.950 - 0 Normalized mean entropy S5320
OMA 1 1.010 - - QHG58433
OrthoFinder 1 1.000 - - FOG0003143
OrthoInspector 1 1.000 - - oto100347
orthoMCL 1 0.900 - - OOG6_101979
Panther 1 1.100 - - LDO PTHR45748
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R2108
SonicParanoid 1 1.000 - - X2110
TreeFam 1 0.960 - -
1514.740

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