DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment fab1 and FAB1C

DIOPT Version :9

Sequence 1:NP_611269.1 Gene:fab1 / 37033 FlyBaseID:FBgn0028741 Length:1809 Species:Drosophila melanogaster
Sequence 2:NP_177257.3 Gene:FAB1C / 843440 AraportID:AT1G71010 Length:1648 Species:Arabidopsis thaliana


Alignment Length:1880 Identity:458/1880 - (24%)
Similarity:763/1880 - (40%) Gaps:494/1880 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly   165 TKNNNDLRNYKDTELQRFWMPDSKAKECYDCSQKFSTFRRKHHCRLCGQIFCSKCCNQVVPGMII 229
            |.:::|......:..|.|.:....:|.|:||..|   ..:.:.|..||..:|..|.:..      
plant    20 TSDSSDSLFLLSSSKQDFGIMPIVSKMCHDCGTK---VEQGYCCLSCGSCWCKSCSDTE------ 75

  Fly   230 RCDGDLKVCNYCSKIVLTFLKSSSSEMGQDMQELQQHLSNKLEVQDSGSSLAKHPQMQRAPLPRK 294
              :..:|:|..|.               .:::||:....:|:..:||             |.| .
plant    76 --ESKMKLCRECD---------------AEVRELRVKSYDKVHPRDS-------------PDP-P 109

  Fly   295 TSVGYQEERFSSHPTYTTLSIDDRKNILQQSNSLITLHEEMQRDLPAQNCGQRLIEFLNSNNKSA 359
            :|:..:.|..:|     :|.|.|.:|:     :.|..:.....:..|:.||::|:...:.|.:.:
plant   110 SSLATESESLAS-----SLEIRDCRNM-----ASIRCYPSRGEEEEARYCGKQLLSPSSDNYQDS 164

  Fly   360 NEVQAVAILNAMLAAGFLEPIVPDPEQMDFDSSLHYKFSKSSSSDTSRTMSP------------- 411
            :::::.::                       |:.|..||..||:.:|...||             
plant   165 SDIESGSV-----------------------SARHELFSCKSSAGSSPHDSPLRNNFSPLGRFVQ 206

  Fly   412 -------------------------------QFEANPHAE-------------------PQPPKS 426
                                           ..|...|.|                   |.||:.
plant   207 HAKDLRSPTVCSFDNHQEQLLADNLVKPGQGVLEQEDHEEEEDKLQQPLDFENNGRIWYPPPPED 271

  Fly   427 MDQSAEEKEKELENELENDRCYTTATSKLLAS-----------------------YCEHEEQLLA 468
            .:..||......::  |:|....:||...|:|                       ..:|...|:|
plant   272 ENDDAESNYFHYDD--EDDDIGDSATEFSLSSSFSSHIPTKEKLGENSNEPLRTVVHDHFRALVA 334

  Fly   469 QMLRAHNLDQ-------EWDKVLQMLCSTAANHFKPEHCSNDLMDIRNYVNFKKVPGGRRKDSKI 526
            ::||...|..       ||..::..|...|||..||:..:...||..|||..|.|..|.:.:|.:
plant   335 ELLRGEELSPSDDGSAGEWLDIVTALAWQAANFVKPDTRAGGSMDPGNYVKIKCVASGNQNESIL 399

  Fly   527 VHGVAFSKNVAHKDMATHVPFPRILLLQCPIVYERIEGKFVTIETVLLQEKEYLRNVCARIMSFK 591
            :.|:..|||:.||.|.:....||::||...:.|:|:.|:..:..|:|.||.|:::.:.|:|.|.:
plant   400 IRGIVCSKNITHKRMISQYKNPRVMLLAGSLEYQRVAGQLASFNTLLQQENEHMKAIIAKIESLR 464

  Fly   592 PNVVLVHKNVAGIAQDLLRSYEVTLVLDVKLSVMERLSRTLQCDIVSSIESNITMPKLGYCNDFY 656
            |||:||.|:.:..||..|...|::|||:||.|:::|::|.....:..|::| |:..:||:|..|.
plant   465 PNVLLVEKSASSYAQQYLLEKEISLVLNVKRSLLDRIARCTGAVLCPSLDS-ISTARLGHCELFR 528

  Fly   657 IRNY-------------NGKTLMFFEKLTNPRGYTCLLRGGSNAELTRVKRVASALLFARYNWRL 708
            ....             ..:|||:||......|.|.:|||....||.:||.|....:||.|:..|
plant   529 TERVLEQHEAGNQSNRKPSRTLMYFEGCPRRLGCTVVLRGSCREELKKVKHVIQYAVFAAYHLSL 593

  Fly   709 EMSFLLNEFAQPLSPKPSIFDSKETSPKTETEAELRSKRPIILERKSEDKITTIVSENVSDFTDP 773
            |.|||.:|.|              :.||      :|.|:|.::...|:.:   |:.|.:|..|..
plant   594 ETSFLADEGA--------------SLPK------IRLKQPGMVRTASQRR---IIDEGISLITQS 635

  Fly   774 LRASQAEALSTSPCAPPVVEALAVEPRYDNRFRTALSSTLLSVSPFLTFPLPYLETEQGRKCKL- 837
            ...:.::||         :|..|.|..:                   |.|:|..|.     |:. 
plant   636 PTETDSQAL---------LETAAHEDEH-------------------TAPMPEHEV-----CESL 667

  Fly   838 ------RKLFPAELYFSKQWSRTGLERPDSMGDGEAGKSEPGNKENQMQLLPAHDFVLMKITAPA 896
                  .::||..       |....|:.|:: :|:...:......:..||...|:..|.      
plant   668 CEDFDPTQIFPPS-------SEVETEQSDTL-NGDFANNLVTRSYSSNQLNDLHEPTLC------ 718

  Fly   897 SSRDIQSKLAEFRSFGGRLPKGKAPMLRPKKKNAEVIQRPQKVSE-EQLYKDALDPQ------NH 954
                :.|::.|..:   :.|.|:....|.:::|..|  .||.:.: |..|:|.:..:      :|
plant   719 ----LSSEIPETPT---QQPSGEEDNGRGEEENQLV--NPQDLPQHESFYEDDVSSEYFSAADSH 774

  Fly   955 QRLPVLFCSFHYNPKGV--SSFCKLPMLLDMKFYGQYDIMLEQFLQRYCCLFNSMCPSCNLPMLG 1017
            |.:.|.|.|     :.|  .|.|:...||.:||||.:|..|.::|:.......|.|.||...:..
plant   775 QSILVSFSS-----RCVLKESVCERSRLLRIKFYGSFDKPLGRYLKDDLFDKTSSCRSCKELVDA 834

  Fly  1018 HVRRYVHSLGCVHVYL----TEDLTRSDPTRIYFTSWCSIC------NATTPTIPLSDAAKCLSL 1072
            ||..|.|..|.:.:.:    :..|......:|:....|..|      ...|..:.:||||..||.
plant   835 HVLCYSHQNGNLTINVRRLPSMKLPGEQDGKIWMWHRCLRCAHVDGVPPATRRVVMSDAAWGLSF 899

  Fly  1073 AKYLEMRFHGHAYKRRPPSTDAEQGGTVCEHSLHRDYVHHFSFRGVGAKFQYTPVEVWETDLPSL 1137
            .|:||:.|..||...|..|         |.|||.||.:..:.|..:.|.|:|:|:.:....||..
plant   900 GKFLELSFSNHATANRVAS---------CGHSLQRDCLRFYGFGNMVAFFRYSPINILTVLLPPS 955

  Fly  1138 TVQLDL-PQP----FQSAQVQEEIKNFSIKGHEVYNRIHERIADLATEEENSPLVQHLKTMLTHD 1197
            .::.:. ||.    .::|::..:::....:..::.||:.|: :.|...|::.....|.:.:...|
plant   956 MLEFNSHPQQEWIRTEAAELVGKMRTMYTEISDMLNRMEEK-SSLLEPEQSEACDLHSRIIGLID 1019

  Fly  1198 QFIFKQKIEIVHTL--LTDNRATAYDTSDALAM--ARRALAESIELW------------------ 1240
            |.: |:|.|....|  :.:.......:.|.|.:  .||||......|                  
plant  1020 QLV-KEKDEYDDALQPIFEENLQIQGSLDILELNRLRRALMIGAHAWDHQLYLLNSQLKKASVFK 1083

  Fly  1241 --------GPRLQEIEKLTAK---------QAHHIDS---------------GTICTEEL----- 1268
                    .|.:.:..|:..:         :..|.||               ||..:|.:     
plant  1084 TGDDNAPRNPEMHDPPKIDRRMQEGSDERDEQSHTDSEANGDNKDPENIPSPGTSLSERIDSAWL 1148

  Fly  1269 -------RPEQVQTADSSKVTTSSLPKENDPLECPSEDTETGASNSQTVLDKNFSIDQMLASTV- 1325
                   :.|.:...:......|||.:...|:...|.|:   |...|..:.|......:..||: 
plant  1149 GSFQNLEKAETIAETEGFSAVNSSLRRLARPIRVQSFDS---AIRFQERIQKGLPPSSLYLSTLR 1210

  Fly  1326 ---------NVYSDKKS-IRKILTQLLP---------SGNQVNPLQSPFPAQD--HLTLP---LG 1366
                     |:..|..| :.:..:|:||         .|:....:.|.....|  .:.:|   |.
plant  1211 SFHASGEYRNMVRDPVSNVMRTYSQMLPLEVQKLDLIVGSAPTYISSASQMADGARMLIPQRGLN 1275

  Fly  1367 SIPIHVRETDLSSVIAYSLTSMDYQKAIDEAEANSNAAHSSPQLKRKIPLAESVSDAEDSPSLSR 1431
            .|.:.|.:.|.:||::|::.|.:|::.|    .|...|.||.        :.::::.|..||...
plant  1276 DIVVPVYDDDPASVVSYAINSKEYKEWI----VNKGLASSSS--------SSNLNNRESEPSAFS 1328

  Fly  1432 TSSNTSAAPNASVPSPATAASESEEKSKERIKQPPSPHITLAFQDHS----------CQFQCKIY 1486
            |..:.|.  :......|...|..:::.        |||:|::|.|.:          .:|....|
plant  1329 TWRSLSM--DVDYIQHAVYGSSQDDRK--------SPHLTISFSDRASSSSTATEGKVKFSVTCY 1383

  Fly  1487 FAREFDAMRSKSLKPPKLDKSLYRRLEKSKMREELRISQSRTGSEMELVRKPSDVGAPRTTEDDS 1551
            ||.:||.:| |:..|.::|                                              
plant  1384 FATQFDTLR-KTCCPSEVD---------------------------------------------- 1401

  Fly  1552 NQEEDARIALARSLCKSVQWEARGGKSGSRFCKTLDDRFVLKEMNSRDMTIFEPFAPKYFEYIDR 1616
                     ..|||.:..:|.|:||||...|.|:||:||::|::...::..||.|||:||:|:..
plant  1402 ---------FVRSLSRCQRWSAQGGKSNVYFAKSLDERFIIKQVVKTELDSFEDFAPEYFKYLKE 1457

  Fly  1617 CQQQQQPTLLAKIFGVFRVSVK--KKDSFVERSVMVMENLFYGCNIENKFDLKGSERNRLVDPSN 1679
            ......||.||||.|:::||:|  |.....:..:||||||||...|...:|||||.|:| .:|:.
plant  1458 SLSSGSPTCLAKILGIYQVSIKHPKGGKETKMDLMVMENLFYNRRISRIYDLKGSARSR-YNPNT 1521

  Fly  1680 QQGEIVLLDENLVQMSWSKPLYVLSHSKTVLRDAIQRDSSFLEKNLVMDYSLLVGLDKKNGVLVL 1744
            ...:.||||.||::...::|:::.|.:|..|..||..|::||....|||||||||.|::...|||
plant  1522 SGADKVLLDMNLLETLRTEPIFLGSKAKRSLERAIWNDTNFLASVDVMDYSLLVGFDEERKELVL 1586

  Fly  1745 GIIDYIRTFTLDKRVESIIKGSGILGG-KGKDPTVVNPERYKQRFIDAMDRYFLTVPDRW 1803
            ||||::|.:|.||.:|:.:|.|||||| |...||:|:|::||:||..||..||||||:.|
plant  1587 GIIDFMRQYTWDKHLETWVKASGILGGPKNASPTIVSPKQYKRRFRKAMTTYFLTVPEPW 1646

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
fab1NP_611269.1 FYVE_PIKfyve_Fab1 182..243 CDD:277264 14/60 (23%)
DEP 329..397 CDD:214489 8/67 (12%)
Fab1_TCP 464..717 CDD:239450 92/272 (34%)
PIPKc 1413..1797 CDD:295374 131/396 (33%)
FAB1CNP_177257.3 Fab1_TCP 330..602 CDD:239450 92/272 (34%)
PIPKc 1370..1640 CDD:295374 118/326 (36%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 153 1.000 Domainoid score I1366
eggNOG 1 0.900 - - E1_COG5253
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 546 1.000 Inparanoid score I258
OMA 1 1.010 - - QHG58433
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0003143
OrthoInspector 1 1.000 - - otm3014
orthoMCL 1 0.900 - - OOG6_101979
Panther 1 1.100 - - O PTHR45748
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X2110
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
1312.830

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