DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment fab1 and FAB1D

DIOPT Version :9

Sequence 1:NP_611269.1 Gene:fab1 / 37033 FlyBaseID:FBgn0028741 Length:1809 Species:Drosophila melanogaster
Sequence 2:NP_001319143.1 Gene:FAB1D / 840326 AraportID:AT1G34260 Length:1456 Species:Arabidopsis thaliana


Alignment Length:1677 Identity:411/1677 - (24%)
Similarity:674/1677 - (40%) Gaps:401/1677 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly   273 VQDSGSSLAKHPQMQRAPLPRKTSVGYQEERFSSHPTYTTLSIDDRKNILQQSNSLITLHEEMQR 337
            ::|..||   |...:...|.::..|...|.:..|.|                 :.::.:.:|..:
plant    29 IEDECSS---HSSQEDVELTKEVKVDRLERKSKSMP-----------------SDILDILDEKSK 73

  Fly   338 DLPAQNCGQRLIEFLNSNNKSANEVQAVAILNAMLAAGFLEPIVPDPEQM-----------DFDS 391
            :...:|     ::||:.....:::|..            .||  |:||..           |.|.
plant    74 ENSVEN-----VQFLSDREDDSDDVPV------------WEP--PEPENPEDEVDGVFADDDDDC 119

  Fly   392 SLHYKFSKSSSSDTSRTMSPQFEANPHAEPQPPKSMDQSAEEKEKELENE---LENDRCYTTATS 453
            ....|::|:|...                    :..|:|:|:::...||.   ||.      |.|
plant   120 CDGSKWNKASLLG--------------------ELSDESSEKRKVYEENRRVMLEE------ADS 158

  Fly   454 KLLASYCEHEEQLLAQMLRAHNLDQE----WDKVLQMLCSTAANHFKPEHCSNDLMDIRNYVNFK 514
            |.        :.:::|::::.....|    |.:::..||..||:..||. .....:|...|:..|
plant   159 KF--------KFIVSQLIKSAGFSIEESGYWFEIVARLCWEAASMLKPA-IDGKSVDPTEYIKVK 214

  Fly   515 KVPGGRRKDSKIVHGVAFSKNVAHKDMATHVPFPRILLLQCPIVYERIEGKFVTIETVLLQEKEY 579
            .:..|...||::..|:.|.|:.|.|.|||....|||:|:: .::...|.| |.::::| .|:.||
plant   215 CIATGSCVDSEVFKGLVFKKHAALKHMATKYEHPRIMLVE-GVLGHPISG-FSSLQSV-NQDNEY 276

  Fly   580 L----RNVCARIMSFKPNVVLVHKNVAGIAQDLLRSYEVTLVLDVKLSVMERLSRTLQCDIVSSI 640
            |    :.|...|.:.||:|:||.|:|:...|..:....||||.|:||..::|:||.:...|: |:
plant   277 LLKYVKPVVDIIEASKPDVMLVEKSVSRDIQKTILDKGVTLVFDMKLHRLQRISRCIGSPIL-SV 340

  Fly   641 ESNITMPKLGYCNDFYI------RNYNG-------KTLMFFEKLTNPRGYTCLLRGGSNAELTRV 692
            :| ::..||.:|:.|.|      .|..|       |||||.|......|.|.||:|..:..|.:|
plant   341 DS-LSSQKLKHCDSFRIEKIVEEHNAAGESDKKPTKTLMFLEGCPTRLGCTILLKGCHSERLKKV 404

  Fly   693 KRVASALLFARYNWRLEMSFLLNEFAQPLSPKPSIFDSKETSPKTETEAELRSKRPIILERKSED 757
            |.|........|:..||.|||.:....    ..:||..:.||...|.|....|..|    |:|..
plant   405 KEVVQYSFILAYHLMLEASFLADRHTM----FSTIFAKEATSCVVEIENFSPSPSP----RESPS 461

  Fly   758 KITTI-VSENVSDFTDPLRASQAEALSTSPCAPPVVEALAVEPRYDNRFRTALSSTLLSVSPFLT 821
            :...| ||....:.|..:. .:|:...............:.|| |:....|..||....:|.:|.
plant   462 EAVDIPVSNGFDEQTIQIN-GEADGEKVGTWESDGDHVFSHEP-YNPVIFTGFSSLSARLSKYLG 524

  Fly   822 F-----PLPY-LETEQGRKCKLRKLFPAELYFSKQWSRTGLERPDSMGDGEAGKSEPGNKENQMQ 880
            |     .:|. ::|:......|                      ||:.:.|...:|. |::.|..
plant   525 FVQNPESVPVSVDTDVSTTSNL----------------------DSIRESEEDTAEK-NEDKQPL 566

  Fly   881 LLPAHDFVLMKITAPASSRDIQSKLAEFRSFGGRLPKGKAPMLRPKKKNAEVIQRPQKVSEEQLY 945
            ||..      ::...:||.|..:|..........| :.::.::...|:||               
plant   567 LLDP------ELPVNSSSDDGDNKSQTENDIESTL-ESQSILVLVSKRNA--------------- 609

  Fly   946 KDALDPQNHQRLPVLFC-SFHYNPKGVSSFCKLPMLLDMKFYGQYDIMLEQFLQRYCCLFN--SM 1007
                       |..:.| ..|::              .:|||..:|:.||:||:.   :||  ::
plant   610 -----------LRGIMCDQRHFS--------------HIKFYKHFDVPLEKFLRD---MFNQRNL 646

  Fly  1008 CPSCNLPMLGHVRRYVH-----SLGCVHVYLTEDLTRSDPTRIYFTSWCSIC---NA---TTPTI 1061
            |.:|......|:..|.|     ::....:.:.:.|......:|:..|.|..|   ||   :|..:
plant   647 CQTCVEFPEAHLYYYAHQNKQLTIQIKRIPVAKGLAGEAKGKIWMWSRCGKCKTKNASRKSTKRV 711

  Fly  1062 PLSDAAKCLSLAKYLEMRFHGHAYKRRPPSTDAEQGGTVCEHSLHRDYVHHFSFRGVGAKFQYTP 1126
            .:|.||:.||..|:||:.|....:..|..|         |.||...|::|.|....:.|...|:.
plant   712 LISTAARSLSFGKFLELSFSQQTFLNRSSS---------CGHSFDSDFLHFFGLGSMVAMLSYSQ 767

  Fly  1127 VEVWETDLPSLTVQLDLPQPFQSAQVQEEIKNFSIKGHEVYNRIHERIADLATEEENS------- 1184
            |..:...||.:.::..:  ..::..:::|.:....||..::......:..|.::..||       
plant   768 VASYTVSLPPMKLESSI--LIKAGWLEKEFQTVFTKGISLFEDAAGFLKRLRSQFTNSDLRYQRA 830

  Fly  1185 -PLVQHLKTMLTHDQFIFKQKI-----------EIVHTLLTDNRATAYDTSDALAMARRALAESI 1237
             .|:.:::.:|.|::.||::.|           ::.|.||..||           |....|.:::
plant   831 RKLLSNIEELLKHERCIFEENIKNSFDKAKTIDDVSHRLLRLNR-----------MRWELLLQAL 884

  Fly  1238 ELWGPRLQEIEKLTAKQAHHIDSGTICTEELRPEQVQTADSSKVTTSSLPK---------ENDPL 1293
             :|..|||.:               :.::.|.|    ::|.:|:....|..         |||  
plant   885 -IWNYRLQSL---------------VLSDRLLP----SSDETKIYEQGLKTVSEAGMTRYEND-- 927

  Fly  1294 ECPSEDTETGASNSQTVLDKNFSI--------DQMLASTVNVYSDKKSIRKILTQLLPSGNQVNP 1350
            ...|:....|..::..|..|:..|        |||..|.|                 |..|:...
plant   928 NKVSDSGSNGGIDTPLVEHKDIPIAGASVGDNDQMAESYV-----------------PEDNESQT 975

  Fly  1351 LQSPFPAQDHLTLPLGSIPIHVRETDLSSVIAYSLTSMDYQKAI-------DEAEANSNAAH--- 1405
            |.|..|   ..|.|:.:   |. :|.| :|..:|....:..|:|       |:..:.||..|   
plant   976 LCSSSP---DTTSPINN---HF-DTHL-AVNVHSTNGQEADKSIPVTGESLDDEVSTSNGPHILG 1032

  Fly  1406 -------SSPQLKRKIPLAESVSDAEDSPSLSRTSSNTSAAPNASVPSPATAASESEEKSKERIK 1463
                   ...:|:.|     .:.|.|....|.....|.....|....:...    :||.|:.||.
plant  1033 WDEWFWLPFEELRSK-----RIVDIEKEYLLKFEYVNNFTQENLQTVNQII----TEESSRLRIS 1088

  Fly  1464 QPPSPHITLAFQDH-SCQFQCKIYFAREFDAMRSKSLKPPKLDKSLYRRLE---------KSKMR 1518
            ......|...::|. |....|.:....     ..:|.||  |.:.::..|:         |...|
plant  1089 LRDDDFIVSDYEDELSSLIACALAHLN-----NEESKKP--LSRCIHGSLQGFLDNNQDSKQTDR 1146

  Fly  1519 EELRISQSRTGSEMELVRKP---------SDVGAPRTT-----EDD--------SNQEEDARIAL 1561
            :..|.|...| :.:|.:..|         ..||.|:.:     .||        .:.|.|...:|
plant  1147 DVSRFSSEST-NRLETLPPPEVLVTFGSVKSVGKPKYSIVSLYADDFRDLRKRCCSSELDYIASL 1210

  Fly  1562 ARSLCKSVQWEARGGKSGSRFCKTLDDRFVLKEMNSRDMTIFEPFAPKYFEYIDRCQQQQQPTLL 1626
            :|  ||  .|:|:||||.|.|.|||||||::||:...:...|..||.:||:|:.........|.|
plant  1211 SR--CK--PWDAKGGKSKSVFAKTLDDRFIVKEIKKTEYESFVTFATEYFKYMKDSYDLGNQTCL 1271

  Fly  1627 AKIFGVFRVSVKK-----KDSFVERSVMVMENLFYGCNIENKFDLKGSERNRLVDPSNQQGEIVL 1686
            ||:.|:.:|:|::     |:  :...:||||||.:...:..::||||:...|....|....:.||
plant  1272 AKVLGIHQVTVRQPKGGGKE--IRHDLMVMENLSFSRKVTRQYDLKGALHARFTATSANGEDDVL 1334

  Fly  1687 LDENLVQMSWSKPLYVLSHSKTVLRDAIQRDSSFLEKNLVMDYSLLVGLDKKNGVLVLGIIDYIR 1751
            ||:|.|......||||...||..|:.|:..|:|||....|||||||||:|.:|..||.|||||:|
plant  1335 LDQNFVNDMNKSPLYVSKTSKQNLQRAVYNDTSFLTSINVMDYSLLVGVDDENHELVCGIIDYLR 1399

  Fly  1752 TFTLDKRVESIIKGSGILGGKGKDPTVVNPERYKQRFIDAMDRYFLTVPDRW 1803
            .:|.||::|:.:| |.::..|...|||::|..||.||...|..:||.|||:|
plant  1400 QYTWDKQLETWVK-SSLVVPKNVQPTVISPIDYKTRFRKFMKTHFLCVPDQW 1450

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
fab1NP_611269.1 FYVE_PIKfyve_Fab1 182..243 CDD:277264
DEP 329..397 CDD:214489 12/78 (15%)
Fab1_TCP 464..717 CDD:239450 86/273 (32%)
PIPKc 1413..1797 CDD:295374 134/420 (32%)
FAB1DNP_001319143.1 Fab1_TCP 161..429 CDD:239450 86/273 (32%)
PIPKc_PIKfyve 1180..1443 CDD:340437 105/269 (39%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 153 1.000 Domainoid score I1366
eggNOG 1 0.900 - - E1_COG5253
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 546 1.000 Inparanoid score I258
OMA 1 1.010 - - QHG58433
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0003143
OrthoInspector 1 1.000 - - otm3014
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR45748
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X2110
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
1211.930

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