DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment fab1 and FAB1B

DIOPT Version :9

Sequence 1:NP_611269.1 Gene:fab1 / 37033 FlyBaseID:FBgn0028741 Length:1809 Species:Drosophila melanogaster
Sequence 2:NP_001319548.1 Gene:FAB1B / 820647 AraportID:AT3G14270 Length:1791 Species:Arabidopsis thaliana


Alignment Length:1963 Identity:509/1963 - (25%)
Similarity:798/1963 - (40%) Gaps:502/1963 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly   143 TSEANQGRTVSNVLKHISNIVATKNNNDLRNYKDTELQRFWMPDSKAKECYDCSQKFSTFRRKHH 207
            |.::| .||.|.::..|      |:....|:...|..:.|||||...:.||:|..:|:...|:||
plant     3 TRDSN-NRTFSEIVGLI------KSWLPWRSEPATVSRDFWMPDQSCRVCYECDCQFTLINRRHH 60

  Fly   208 CRLCGQIFCSKCCNQVVPGMIIRCDGDL----------KVCNYCSK-----------IVLTFLKS 251
            ||.||::||.||....:|    ....||          :|||||.:           ..:|.|.:
plant    61 CRHCGRVFCGKCTANSIP----FAPSDLRTPREDWERIRVCNYCFRQWEQGDGGPHVSNITELST 121

  Fly   252 SSSEMGQDMQELQQHLSNKLEVQDSGSS--LAKHPQM----QR----------APLPRKTSVGYQ 300
            |.||...        ||:|.....:.||  |...|.:    ||          .....:|||..|
plant   122 SPSETSL--------LSSKTSTTANSSSFALGSMPGLIGLNQRVHHGSDVSLHGVSSMETSVTKQ 178

  Fly   301 EERFSSHPTYTTLSIDDRKNILQQSNSLITLHEEMQRDLPAQNCGQRLIEFLNSNNKSANEVQAV 365
            .:..|...::....::|.......|         ::.|......|....:...|::..|||....
plant   179 GKETSRRSSFIATDVEDPSRFALNS---------IRSDDEYDEYGAYQTDIETSHSPRANEYYGP 234

  Fly   366 AILNAM----LAAGFLEPIVPDPEQMDFDSSLHY-----------KFSKSSSSD----------- 404
            ...|.|    :....|.....|.:.:.....:|.           :|.|.|..|           
plant   235 MEYNGMGIDDVPCKHLGGETADQKSLSGSPLIHQCLESLIREGSEQFQKKSEHDGRDECEASSPA 299

  Fly   405 ---TSRTMSP-QFEANP--HAEPQPPKSMDQSAEEKEKELENELEN------------------- 444
               ..:.:.| .||.|.  ...|:|    :...:|:|..|.:|.:|                   
plant   300 DISDDQVVEPVDFENNGLLWVPPEP----ENEEDERESALFDEEDNEGDASGEWGYLRPSTSFGS 360

  Fly   445 ------DRCYTTATSKLLASYCE-HEEQLLAQMLRAHNL---DQE----WDKVLQMLCSTAANHF 495
                  ||. |....|.:.:..: |...||||:|:..|:   |:|    |.:::..|...|||..
plant   361 GEYRGEDRT-TEEHKKAMKNVVDGHFRALLAQLLQVENISVSDEEGKESWLEIITSLSWEAANLL 424

  Fly   496 KPEHCSNDLMDIRNYVNFKKVPGGRRKDSKIVHGVAFSKNVAHKDMATHVPFPRILLLQCPIVYE 560
            ||:...:..||...||..|.:..|.|.||.:|.||...|||.::.|:|.:...|:|:|...:.|:
plant   425 KPDMSKSGGMDPGGYVKVKCLASGFRHDSMVVKGVVCKKNVVNRRMSTKIEKARLLILGGGLEYQ 489

  Fly   561 RIEGKFVTIETVLLQEKEYLRNVCARIMSFKPNVVLVHKNVAGIAQDLLRSYEVTLVLDVKLSVM 625
            |:..:..:.:|:|.|||::|:...|:|.:.:||::||.|:|:..||:.|.:.:::|||::|..::
plant   490 RVSNQLSSFDTLLQQEKDHLKMAVAKIHAERPNILLVEKSVSRFAQEYLLAKDISLVLNIKRPLL 554

  Fly   626 ERLSRTLQCDIVSSIESNITMPKLGYCNDFYIRNY---NG----------KTLMFFEKLTNPRGY 677
            :|::|.....|:.|:: :::..|||||.:|.:..|   :|          ||||:||....|.|:
plant   555 DRIARCTGAQIIPSVD-HLSSQKLGYCENFRVDRYPEEHGSTGQVGKKVVKTLMYFEHCPKPLGF 618

  Fly   678 TCLLRGGSNAELTRVKRVASALLFARYNWRLEMSFLLNEFAQPLSPKPSIFDSKETSPKTETEAE 742
            |.||||.:..||.:||.|....:||.|:..||.|||.:|.|.|                   |..
plant   619 TILLRGANEDELKKVKHVVQYGVFAAYHLALETSFLADEGASP-------------------ELP 664

  Fly   743 LRSKRPIILERKS---EDKITTIVSENVSDF-TDPLRASQAEALSTSPCAPPVVEALAVEPRYDN 803
            |.|...:.|..||   |..|:|:....||.: ..|...|.||....:  :.||.|.|:       
plant   665 LNSPITVALPDKSTSIERSISTVPGFTVSTYEKSPTMLSCAEPQRAN--SVPVSELLS------- 720

  Fly   804 RFRTALSSTLLSVSPFLTFPLPYLETEQGRKCKLRKLFPAELYFSKQWSRTGLERPD----SMGD 864
                  ::|.||:...:. |:||     |...:.|::.|: ..||:.  ...|..||    |...
plant   721 ------TTTNLSIQKDIP-PIPY-----GSGWQAREINPS-FVFSRH--NISLNLPDRVIESRNS 770

  Fly   865 GEAGKS----EPGNKENQMQL----------LPAHDFVLMKITAPASSRDIQSKLAEFRSFGGRL 915
            ..:|:|    .|.:|.|.:.:          |....||      ..||:...|.:.|.:..|..|
plant   771 DLSGRSVPVDTPADKSNPIVVADETTNNSLHLSGQGFV------RKSSQIGTSIMVENQDNGSEL 829

  Fly   916 PKGKAPMLRPKKKNAEVIQRPQKVSEEQLYKDAL--DPQNHQRLPVLFCSFHYNPKGV--SSFCK 976
            ...:.             |..:|..|.|..|:..  .|.:||.:.|...|     :.|  .:.|:
plant   830 TIAQQ-------------QNNEKPKETQSQKEEFPPSPSDHQSILVSLSS-----RSVWKGTVCE 876

  Fly   977 LPMLLDMKFYGQYDIMLEQFLQRYCCLFNS--MCPSCNLPMLGHVRRYVHSLGCVHV-------Y 1032
            ...|..:|:||.:|..|.:||:.:  ||:.  .|.||.:|...||..|.|..|.:.:       |
plant   877 RSHLFRIKYYGSFDKPLGRFLRDH--LFDQSYRCRSCEMPSEAHVHCYTHRQGSLTISVKKLQDY 939

  Fly  1033 LTEDLTRSDPTRIYFTSWCSIC---NATTPT---IPLSDAAKCLSLAKYLEMRFHGHAYKRRPPS 1091
            |   |......:|:....|..|   |...|.   :.:||||..||..|:||:.|..||...|.  
plant   940 L---LPGEKEGKIWMWHRCLRCPRLNGFPPATLRVVMSDAAWGLSFGKFLELSFSNHAAASRV-- 999

  Fly  1092 TDAEQGGTVCEHSLHRDYVHHFSFRGVGAKFQYTPVEVWETDLPSLTVQLDLP-QPFQSAQVQEE 1155
                   ..|.||||||.:..:.|..:.|.|:|..::|....||...:..:.. |.:...:..|.
plant  1000 -------ACCGHSLHRDCLRFYGFGNMVACFRYATIDVHSVYLPPSILSFNYENQDWIQRETDEV 1057

  Fly  1156 IKNFSIKGHEVYNRIHE--------RIADL--------ATEEEN------------SPLVQHLKT 1192
            |:...:...||.|.|.:        ||.:|        |..|||            .|||..|:.
plant  1058 IERAELLFSEVLNAISQIAEKGFRRRIGELEEVLQKEKAEFEENMQKILHREVNEGQPLVDILEL 1122

  Fly  1193 MLTHDQFIFKQKIEIVHTLLTDNRATAYDTSDALAMARRALAESIELWGPRLQEIEKLTAKQAHH 1257
            ...|.|.:| |.....|.|:..:.....:.||.   .:|...|.     |.|.:.:.|....|..
plant  1123 YRIHRQLLF-QSYMWDHRLINASTLHKLENSDD---TKREENEK-----PPLAKSQTLPEMNAGT 1178

  Fly  1258 IDSGTICTEELRPEQVQTADSSKV--------TTSSLPKEND----------------------- 1291
            ....|.....|.|:...|.|:..:        |.|.|.:|.|                       
plant  1179 NSLLTGSEVNLNPDGDSTGDTGSLNNVQKEADTNSDLYQEKDDGGEVSPSKTLPDTSYPLENKVD 1243

  Fly  1292 ------------------------------------------------------------PLECP 1296
                                                                        |::.|
plant  1244 VRRTQSDGQIVMKNLSATLDAAWIGERQTSVEIPTNNKVSLPPSTMSNSSTFPPISEGLMPIDLP 1308

  Fly  1297 SEDTETGASN--SQTVLDKNF-----SIDQMLASTVNVYSDKKSIRK---ILTQLLPSGNQVNPL 1351
            .:..|...:.  |..:..||:     |:..:....:|.|   :||.|   :.:|.|.:..:.:|:
plant  1309 EQQNEFKVAYPVSPALPSKNYENSEDSVSWLSVPFLNFY---RSINKNFLLSSQKLDTFGEHSPI 1370

  Fly  1352 ------QSPFPAQDHLTLPLG--SIPIHVRETDLSSVIAYSLTSMDYQKAIDEAEANSNAAHSSP 1408
                  ::.......|.||:|  .|.:.|.:.:.:|:|||:|.|.:||:. ..||..|..::.| 
plant  1371 YISSFREAELQGGPRLLLPVGLNDIVVPVYDDEPTSMIAYALMSPEYQRQ-TSAEGESLVSYPS- 1433

  Fly  1409 QLKRKIPLAESVSDAEDSPSLSRTSSNTSAAPNASVPSPATAASESEEKS-KERIKQPPSPHITL 1472
            :|....|:.:::.|    ||.|          |.||.....:.|.|...| .:.:....:.|..:
plant  1434 ELNIPRPVDDTIFD----PSRS----------NGSVDESILSISSSRSTSLLDPLSYTKALHARV 1484

  Fly  1473 AFQDH----SCQFQCKIYFAREFDAMRSKSLKPPKLDKSLYRRLEKSKMREELRISQSRTGSEME 1533
            ::.:.    ..::....|:|:.|:|:|...|.                             ||:|
plant  1485 SYGEDGTLGKVKYTVTCYYAKRFEALRGICLP-----------------------------SELE 1520

  Fly  1534 LVRKPSDVGAPRTTEDDSNQEEDARIALARSLCKSVQWEARGGKSGSRFCKTLDDRFVLKEMNSR 1598
            .:                           |||.:..:|.|:||||...|.|||||||::|::...
plant  1521 YI---------------------------RSLSRCKKWGAQGGKSNVFFAKTLDDRFIIKQVTKT 1558

  Fly  1599 DMTIFEPFAPKYFEYIDRCQQQQQPTLLAKIFGVFRVSVK--KKDSFVERSVMVMENLFYGCNIE 1661
            ::..|..|||.||:|:......:.||.||||.|:::|:.|  |.....:..|::||||.:|..::
plant  1559 ELESFIKFAPAYFKYLSESISTKSPTCLAKILGIYQVATKQLKSGKETKMDVLIMENLLFGRTVK 1623

  Fly  1662 NKFDLKGSERNRLVDPSNQQGEIVLLDENLVQMSWSKPLYVLSHSKTVLRDAIQRDSSFLEKNLV 1726
            ..:|||||.|.| .:|.:.....||||:||::...:.|::|.:.:|.:|..|:..|::||....|
plant  1624 RLYDLKGSSRAR-YNPDSSGSNKVLLDQNLIEAMPTSPIFVGNKAKRLLERAVWNDTAFLALGDV 1687

  Fly  1727 MDYSLLVGLDKKNGVLVLGIIDYIRTFTLDKRVESIIKGSGILGG-KGKDPTVVNPERYKQRFID 1790
            ||||||||:|::...|||||||::|.:|.||.:||.:|.:||||| |.:.|||::|::||:||..
plant  1688 MDYSLLVGVDEEKNELVLGIIDFLRQYTWDKHLESWVKFTGILGGPKNEAPTVISPKQYKRRFRK 1752

  Fly  1791 AMDRYFLTVPDRW 1803
            ||..|||.|||:|
plant  1753 AMTTYFLMVPDQW 1765

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
fab1NP_611269.1 FYVE_PIKfyve_Fab1 182..243 CDD:277264 28/70 (40%)
DEP 329..397 CDD:214489 11/82 (13%)
Fab1_TCP 464..717 CDD:239450 96/272 (35%)
PIPKc 1413..1797 CDD:295374 125/391 (32%)
FAB1BNP_001319548.1 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 153 1.000 Domainoid score I1366
eggNOG 1 0.900 - - E1_COG5253
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 546 1.000 Inparanoid score I258
OMA 1 1.010 - - QHG58433
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0003143
OrthoInspector 1 1.000 - - otm3014
orthoMCL 1 0.900 - - OOG6_101979
Panther 1 1.100 - - LDO PTHR45748
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X2110
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
1312.830

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