DRSC/TRiP Functional Genomics Resources

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Protein Alignment fab1 and Hsp60B

DIOPT Version :9

Sequence 1:NP_611269.1 Gene:fab1 / 37033 FlyBaseID:FBgn0028741 Length:1809 Species:Drosophila melanogaster
Sequence 2:NP_524925.1 Gene:Hsp60B / 48572 FlyBaseID:FBgn0011244 Length:648 Species:Drosophila melanogaster


Alignment Length:607 Identity:121/607 - (19%)
Similarity:216/607 - (35%) Gaps:142/607 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly  1222 TSDALAMARR-ALAES-IELWGPRLQEIEKLTAKQAHHIDSGTICTEELRPEQVQTADSSKVTTS 1284
            |.|...:||. ||.:. :.|....:|::...|.:.|   ..|| .|..:....:.....:::|..
  Fly    68 TKDGFTVARSIALKDQHMNLGAKLVQDVADNTNESA---GDGT-TTATVLARAIAKEGFNQITMG 128

  Fly  1285 SLPKE------------NDPLECPSEDTETGASNSQTVLDKNFSIDQMLASTVNVYSDKKSIRKI 1337
            :.|.|            .|.|:..|:..|| ....|.|...:.:.|..:...:...:||...|..
  Fly   129 ANPVEIRRGVMLAVDVVKDKLKEMSKAVET-REEIQQVATLSANGDTEIGRLIGEATDKVGPRGT 192

  Fly  1338 LTQLLPSG----NQVNPLQSPFPAQDHLTLPLGSI-PIHVRETDLSSV-IAYSLTSMDYQKAIDE 1396
            :|  :..|    :::|.:|.       |....|.: |..|..:..|.| .|.:|..:..:|....
  Fly   193 IT--VKDGKRLKDELNIIQG-------LRFDNGYVSPFFVNSSKGSKVEFANALVMISLKKITGL 248

  Fly  1397 AEANSNAAHSSPQLKRKIPLAESVSD------------------AEDSPSL----SRTSSNTSAA 1439
            ::.......|..|.:..|.:||.:|.                  |..|||.    .....:.|||
  Fly   249 SQIVKGLEQSLRQRRPLIIIAEDISGEALNALVLNKLRLGLQVCAVKSPSYGHHRKELIGDISAA 313

  Fly  1440 PNASVPSPATAASESEEKSKERIKQPPSPHITLAFQDHSCQFQCK-------IYFAREFDAMRSK 1497
            ..|::.......|:.||...|.:.|.....|:   :|.:...|.|       :...:..|.:..|
  Fly   314 TGATIFGDDINYSKMEEAKLEDLGQVGEAVIS---KDSTMLLQGKPKTGLLEMRIQQIQDELAEK 375

  Fly  1498 SLKPPKLDKSLYRRLEKSKMREELRISQSRTGSEMELVRKPSDVGAPRTTEDDSNQEEDARIALA 1562
            .:||.:.|: |.:||  |.:.:.:.:.....|||:|:                 |:::| |:..|
  Fly   376 QIKPEQRDR-LRQRL--SALTKGVAVLHIGGGSEVEV-----------------NEKKD-RVVDA 419

  Fly  1563 RSLCKSVQWEARGGKSGSRFCKTLDDRFVLKEMNSRDMTIFEPFAPKYFEYIDRCQQQQQP-TLL 1626
            .:..::...|......|:.|.:.:.   .|:|:.:....:     .|..:.:  |...:.| ..:
  Fly   420 LNATRAAIEEGIVPGGGTAFLRCIP---YLQELKTESADL-----QKGVDIV--CNALRMPCQTI 474

  Fly  1627 AKIFGVFRVSVKKKDSFVERSVMVMENLFYGCNIENKFDLKGSERNRLV-----DPSNQQGEIVL 1686
            |:..||             ...||:..:..|.. :..:|..|.|..|||     ||:.      :
  Fly   475 AQNAGV-------------DGPMVVAKVLNGSE-DYGYDAMGDEYCRLVEKGIIDPTK------V 519

  Fly  1687 LDENLVQMSWSKPLYVLSHSKTVLRDAIQRDSSFLEKNLVMDYSLLVGLDKKNGVLVLGIIDYIR 1751
            |...:...:....|  ||.::.|:.|:  |:...|.|.......:..|||...|    |:.:.  
  Fly   520 LRTAITDAAGVASL--LSTTEVVITDS--RNDDLLSKLSGAGGGMDDGLDMNMG----GLEEL-- 574

  Fly  1752 TFTLDKRVESIIKGSGILGGKG 1773
                     :.:.|.|.:||.|
  Fly   575 ---------AALSGLGGMGGMG 587

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
fab1NP_611269.1 FYVE_PIKfyve_Fab1 182..243 CDD:277264
DEP 329..397 CDD:214489
Fab1_TCP 464..717 CDD:239450
PIPKc 1413..1797 CDD:295374 79/396 (20%)
Hsp60BNP_524925.1 PTZ00114 9..558 CDD:185455 111/561 (20%)
GroEL 22..543 CDD:239460 107/544 (20%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45453472
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
10.930

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