DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment fab1 and pip5k1bb

DIOPT Version :9

Sequence 1:NP_611269.1 Gene:fab1 / 37033 FlyBaseID:FBgn0028741 Length:1809 Species:Drosophila melanogaster
Sequence 2:XP_005166786.1 Gene:pip5k1bb / 447840 ZFINID:ZDB-GENE-040912-141 Length:528 Species:Danio rerio


Alignment Length:479 Identity:102/479 - (21%)
Similarity:157/479 - (32%) Gaps:145/479 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly  1397 AEANSNAAHSSPQLKRKIPLAESVSDAEDSP---SLSRTSSNTSAAPNASVPSPATAASESEEKS 1458
            :.||:|...||...:|:....::.|.|....   .:..|..|.::.|:..|........||....
Zfish     2 SSANANGVGSSGNNRREKTYKKTTSSALKGAIQLGIGYTVGNLTSKPDRDVLMQDFYVVESVFLP 66

  Fly  1459 KERIKQPPSPHITLAFQDHSCQFQCKIYFAREFDAMRSK-SLKPPKLDKSLYRRLEKSKMREELR 1522
            .|.....|:.|    :.|    |:.|.|....|...|.. .:||   |..||             
Zfish    67 SEGSNLTPAHH----YPD----FRFKTYAPLAFRYFRELFGIKP---DDYLY------------- 107

  Fly  1523 ISQSRTGSEMELVRKPSDVGAPRTTEDDSNQEEDARIALARSLCKSVQWE-ARGGKSGSRFCKTL 1586
                                                     |:||....| :..|.|||.|..|.
Zfish   108 -----------------------------------------SICKEPLIELSNPGASGSLFYLTS 131

  Fly  1587 DDRFVLKEMNSRDMTIFEPFAPKYFEYIDRCQQQQQPTLLAKIFGVFRVSVKKKDSFVERSVMVM 1651
            ||.|::|.:..::....:...|.|:..::    |...|||.|.:|::.|    :...:...::||
Zfish   132 DDEFIIKTVQHKEAEFLQKLLPGYYMNLN----QNPRTLLPKFYGLYCV----QSGGINIRLVVM 188

  Fly  1652 ENLF-YGCNIENKFDLKGSERNRLVDPSNQQGEI-VLLDENLVQMSWSKPLYVLSHSKTVLRDAI 1714
            .|:. ....:..|:|||||...|......::... ...|.:.|.|  ...||....:...|...:
Zfish   189 NNVLPRSVKMHYKYDLKGSTYKRRASRKEREKPCPTYKDLDFVDM--HDGLYFDPETYNALMKTL 251

  Fly  1715 QRDSSFLEKNLVMDYSLLVGL-------------------------------------------- 1735
            |||...||...:||||||:|:                                            
Zfish   252 QRDCRVLESFKIMDYSLLLGVHVLDQSHRDGDGSAVDGKRTVGQKVLYSTAMESIQGDGKAAEAL 316

  Fly  1736 ---DKKNGV-----------LVLGIIDYIRTFTLDKRVESIIKGSGILGGKGKDPTVVNPERYKQ 1786
               |...|:           :.|||||.::::...|::|...|.   |...|...:|..|..|..
Zfish   317 TTDDTMGGIPAKTHRDEKVLIFLGIIDILQSYRFIKKLEHSWKA---LVYDGDTVSVHRPSFYAN 378

  Fly  1787 RFIDAM-DRYF-LTVPDRWEGLSK 1808
            ||:..| .|.| ...|:|:....|
Zfish   379 RFLKFMSSRVFRKNQPNRFSPSKK 402

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
fab1NP_611269.1 FYVE_PIKfyve_Fab1 182..243 CDD:277264
DEP 329..397 CDD:214489
Fab1_TCP 464..717 CDD:239450
PIPKc 1413..1797 CDD:295374 93/450 (21%)
pip5k1bbXP_005166786.1 PIPKc 53..386 CDD:214623 85/410 (21%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5253
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
32.810

Return to query results.
Submit another query.