DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment fab1 and CCT4

DIOPT Version :10

Sequence 1:NP_611269.1 Gene:fab1 / 37033 FlyBaseID:FBgn0028741 Length:1809 Species:Drosophila melanogaster
Sequence 2:NP_609579.1 Gene:CCT4 / 34674 FlyBaseID:FBgn0032444 Length:533 Species:Drosophila melanogaster


Alignment Length:526 Identity:118/526 - (22%)
Similarity:195/526 - (37%) Gaps:146/526 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly   316 DDRKNILQQSNSLITLHEEMQRDLPAQNCGQRLIEFLNSNNKSANE--VQAVAILNAMLAAGFLE 378
            :|...||:|.|   .||       ||   .:.|:|...:.:.:|.:  ...|.|..|:|.|  .|
  Fly    65 NDGATILKQMN---VLH-------PA---AKMLVELSRAQDVAAGDGTTSVVVIAGALLEA--CE 114

  Fly   379 PIVPDPEQMDFDSSLHYKFSKSSSSDTSRTMSPQFEANPHAEPQPPKSMDQSAEEKEKELENELE 443
            .::        ...||    .::.||:.:..|                  ..|.|..|::...:|
  Fly   115 KLL--------QKGLH----PTAISDSFQRCS------------------NKAVEILKQMSTPIE 149

  Fly   444 NDRCYT---TATSKLLASYCEHEEQLLAQMLRAHNLDQEWDKVLQMLCSTAANHFKP-EHCSNDL 504
            .|...|   :|::.|.:.....:..|||.:        ..|.||::.        .| :..|.||
  Fly   150 LDDRETLIKSASTSLNSKVVSQQSSLLAPI--------AVDAVLKVT--------DPGKETSVDL 198

  Fly   505 MDIRNYVNFKKVPGGRRKDSKIVHGVAFSKNVAHKDMATHVPFPRILLLQCPIV-------YERI 562
            .:|:...:.    ||..:|:::|.|:.|:...|..:....:...:|.|:|..|.       :..|
  Fly   199 KNIKVISSL----GGTVEDTELVDGLVFTCRSAGSNAPKRIEKAKIGLIQFCISAPKTDMDHNVI 259

  Fly   563 EGKFVTIETVLLQEKEYLRNVCARIMSFKPNVVLVHKN-----VAGIAQDLLRSYEVTLVLDVKL 622
            ...:..::.||.:|:.|:.|:..:|.....||:||.|:     |:.:||..|...:..:|.||:.
  Fly   260 VSDYAAMDRVLKEERSYILNIVKQIKKSGCNVLLVQKSILRDAVSDLAQHFLDKIKCMVVKDVER 324

  Fly   623 SVMERLSRTLQCDIVSSIESNITMPKLGYCNDFYIRNYNGKTLM--------FFEKLTN----PR 675
            ..:|.:.:||.|..::|::            .|...|.:...|:        .|.|:|.    .|
  Fly   325 EDIEFVCKTLHCRPIASLD------------HFTAENLSSADLVEEVASGTNKFVKITGIQNMGR 377

  Fly   676 GYTCLLRGGSNAELTRVKR-VASALLFARYNWRL------------EMSFLLNEFAQPLSPKP-- 725
            ..:.:.||.:...|....| :..||...|...:|            ||:..|...||.:....  
  Fly   378 TVSIICRGSNKLVLEEAARSLHDALCVVRCLVKLRAQIVGGGAPEIEMALQLAALAQTVEGVDAY 442

  Fly   726 ---SIFDSKETSPKT----------ETEAELRS------KRPIILERKSEDKITTIVSENVSDFT 771
               :..|:.|..|.|          .|..|||:      |...|..||.  .||.|.:|||   .
  Fly   443 CFRAFADALEVIPSTLAENAGLNPIATVTELRNRHAQGEKNAGINVRKG--AITDIFAENV---V 502

  Fly   772 DPLRAS 777
            .||..|
  Fly   503 QPLLVS 508

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
fab1NP_611269.1 FYVE_PIKfyve_Fab1 182..243 CDD:277264
DEP 329..397 CDD:214489 15/69 (22%)
Fab1_TCP 464..717 CDD:239450 64/290 (22%)
PIPKc_PIKfyve 1479..1796 CDD:340437
CCT4NP_609579.1 TCP1_delta 18..531 CDD:239454 118/526 (22%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.